16 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01906	RING-type domain-containing protein. (415 aa)
	PV08_06373	AAA domain-containing protein. (697 aa)
	PV08_00622	Uncharacterized protein. (710 aa)
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_10339	Uncharacterized protein. (360 aa)
	GUF1	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner. (659 aa)
	PV08_10885	MIT domain-containing protein. (1177 aa)
	PV08_00580	RING-type domain-containing protein. (298 aa)
	PV08_08191	OTU domain-containing protein. (468 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_09235	OTU domain-containing protein. (415 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_03015	RING-type domain-containing protein. (530 aa)
	PV08_01680	Cell division control protein 48; Belongs to the AAA ATPase family. (795 aa)
	PV08_01956	Uncharacterized protein. (546 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GUF1	PV08_00223	A0A0D2BI52	A0A0D2C7U5	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Polyubiquitin.	0.526
GUF1	PV08_01928	A0A0D2BI52	A0A0D2BQS0	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Ubiquitin-like domain-containing protein.	0.565
GUF1	PV08_10350	A0A0D2BI52	A0A0D1Y801	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	Ubiquitin-40S ribosomal protein S27a.	0.565
GUF1	PV08_10885	A0A0D2BI52	A0A0D2BJY9	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	MIT domain-containing protein.	0.649
GUF1	PV08_11376	A0A0D2BI52	A0A0D2AUK8	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	BZIP domain-containing protein.	0.565
PV08_00223	GUF1	A0A0D2C7U5	A0A0D2BI52	Polyubiquitin.	Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.	0.526
PV08_00223	PV08_00622	A0A0D2C7U5	A0A0D2A5L7	Polyubiquitin.	Uncharacterized protein.	0.952
PV08_00223	PV08_01680	A0A0D2C7U5	A0A0D1Z0H6	Polyubiquitin.	Cell division control protein 48; Belongs to the AAA ATPase family.	0.971
PV08_00223	PV08_01906	A0A0D2C7U5	A0A0D1Z0Z5	Polyubiquitin.	RING-type domain-containing protein.	0.562
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_01956	A0A0D2C7U5	A0A0D1Z139	Polyubiquitin.	Uncharacterized protein.	0.971
PV08_00223	PV08_03015	A0A0D2C7U5	A0A0D1YTY6	Polyubiquitin.	RING-type domain-containing protein.	0.562
PV08_00223	PV08_06373	A0A0D2C7U5	A0A0D1ZU51	Polyubiquitin.	AAA domain-containing protein.	0.817
PV08_00223	PV08_08191	A0A0D2C7U5	A0A0D2BPL2	Polyubiquitin.	OTU domain-containing protein.	0.898
PV08_00223	PV08_09235	A0A0D2C7U5	A0A0D1YAK5	Polyubiquitin.	OTU domain-containing protein.	0.777
PV08_00223	PV08_10339	A0A0D2C7U5	A0A0D2AXB6	Polyubiquitin.	Uncharacterized protein.	0.951
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_10885	A0A0D2C7U5	A0A0D2BJY9	Polyubiquitin.	MIT domain-containing protein.	0.526
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_00580	PV08_01928	A0A0D2BNA9	A0A0D2BQS0	RING-type domain-containing protein.	Ubiquitin-like domain-containing protein.	0.403