STRINGSTRING
PV08_10350 PV08_10350 PV08_01919 PV08_01919 PV08_00894 PV08_00894 PV08_00223 PV08_00223 SLX1 SLX1 PV08_06415 PV08_06415 PV08_02150 PV08_02150 PV08_02143 PV08_02143 PV08_01928 PV08_01928 PV08_01602 PV08_01602 PV08_00960 PV08_00960 PV08_00893 PV08_00893 PV08_09505 PV08_09505 PV08_03422 PV08_03422 PV08_03497 PV08_03497 PV08_11523 PV08_11523 PV08_03907 PV08_03907 PV08_05689 PV08_05689 PV08_07845 PV08_07845 PV08_07339 PV08_07339 PV08_07322 PV08_07322 PV08_09279 PV08_09279 PV08_09216 PV08_09216 PV08_10289 PV08_10289 PV08_10214 PV08_10214 PV08_11542 PV08_11542 PV08_11376 PV08_11376 PV08_02267 PV08_02267 PV08_01269 PV08_01269 PV08_04892 PV08_04892 PV08_06173 PV08_06173 PV08_08818 PV08_08818 PV08_10010 PV08_10010 PV08_11329 PV08_11329 PV08_01570 PV08_01570 PV08_05176 PV08_05176 PV08_04352 PV08_04352 PV08_03991 PV08_03991 PV08_03724 PV08_03724 PV08_05231 PV08_05231 PV08_08323 PV08_08323 PV08_10857 PV08_10857 PV08_11585 PV08_11585
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_01919Protein kinase domain-containing protein. (746 aa)
PV08_00894Uncharacterized protein; Belongs to the PI3/PI4-kinase family. (2287 aa)
PV08_00223Polyubiquitin. (305 aa)
SLX1Structure-specific endonuclease subunit SLX1; Catalytic subunit of the SLX1-SLX4 structure-specific endonuclease that resolves DNA secondary structures generated during DNA repair and recombination. Has endonuclease activity towards branched DNA substrates, introducing single-strand cuts in duplex DNA close to junctions with ss-DNA. (407 aa)
PV08_06415FHA domain-containing protein. (731 aa)
PV08_02150Uncharacterized protein. (467 aa)
PV08_02143Uncharacterized protein. (581 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_01602Serine/threonine-protein phosphatase. (325 aa)
PV08_00960Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (463 aa)
PV08_00893Chromosome segregation in meiosis protein; Plays an important role in the control of DNA replication and the maintenance of replication fork stability. Belongs to the CSM3 family. (460 aa)
PV08_09505ERCC4 domain-containing protein. (659 aa)
PV08_03422Protein kinase domain-containing protein. (538 aa)
PV08_03497Uncharacterized protein. (530 aa)
PV08_11523ERCC4 domain-containing protein. (615 aa)
PV08_03907Uncharacterized protein. (1179 aa)
PV08_05689Protein kinase domain-containing protein. (311 aa)
PV08_07845DUF1767 domain-containing protein. (291 aa)
PV08_07339Asparagine-tRNA ligase. (573 aa)
PV08_07322Uncharacterized protein. (1513 aa)
PV08_09279Uncharacterized protein. (876 aa)
PV08_09216Uncharacterized protein. (226 aa)
PV08_10289Rad51 domain-containing protein. (519 aa)
PV08_10214Histone H2B; Belongs to the histone H2B family. (141 aa)
PV08_11542XPGI domain-containing protein. (755 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_02267Helicase ATP-binding domain-containing protein. (1253 aa)
PV08_01269Protein kinase domain-containing protein. (522 aa)
PV08_04892FHA domain-containing protein. (854 aa)
PV08_06173Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
PV08_08818RECA_2 domain-containing protein. (447 aa)
PV08_10010Uncharacterized protein. (1018 aa)
PV08_11329DNA repair protein RAD51 homolog; Required both for recombination and for the repair of DNA damage caused by X-rays; Belongs to the RecA family. RAD51 subfamily. (349 aa)
PV08_01570Serine/threonine-protein phosphatase. (443 aa)
PV08_05176Uncharacterized protein. (308 aa)
PV08_04352Uncharacterized protein. (379 aa)
PV08_03991RECA_2 domain-containing protein. (483 aa)
PV08_03724Uncharacterized protein. (871 aa)
PV08_05231Uncharacterized protein. (533 aa)
PV08_08323DNA topoisomerase; Introduces a single-strand break via transesterification at a target site in duplex DNA. Releases the supercoiling and torsional tension of DNA introduced during the DNA replication and transcription by transiently cleaving and rejoining one strand of the DNA duplex. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. Belongs to the type IA topoisomerase family. (625 aa)
PV08_10857Uncharacterized protein. (1184 aa)
PV08_11585Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (419 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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