STRINGSTRING
PV08_10350 PV08_10350 PV08_10406 PV08_10406 PV08_08028 PV08_08028 PV08_08499 PV08_08499 PV08_04892 PV08_04892 PV08_01922 PV08_01922 PV08_11376 PV08_11376 PV08_10214 PV08_10214 PV08_04860 PV08_04860 PV08_03499 PV08_03499 PV08_09927 PV08_09927 PV08_01657 PV08_01657 PV08_01928 PV08_01928 PV08_02150 PV08_02150 PV08_06415 PV08_06415 PV08_02361 PV08_02361 PV08_00223 PV08_00223 PV08_01029 PV08_01029 PV08_02129 PV08_02129
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_10406Uncharacterized protein. (1122 aa)
PV08_08028Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. (768 aa)
PV08_08499UBX domain-containing protein. (535 aa)
PV08_04892FHA domain-containing protein. (854 aa)
PV08_01922Uncharacterized protein; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (133 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_10214Histone H2B; Belongs to the histone H2B family. (141 aa)
PV08_04860Uncharacterized protein. (683 aa)
PV08_03499Uncharacterized protein. (1306 aa)
PV08_09927Uncharacterized protein. (304 aa)
PV08_01657Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (554 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_02150Uncharacterized protein. (467 aa)
PV08_06415FHA domain-containing protein. (731 aa)
PV08_02361Uncharacterized protein. (1359 aa)
PV08_00223Polyubiquitin. (305 aa)
PV08_01029Uncharacterized protein. (1037 aa)
PV08_02129Serine/threonine-protein kinase Tel1; Serine/threonine protein kinase which activates checkpoint signaling upon genotoxic stresses such as ionizing radiation (IR), ultraviolet light (UV), or DNA replication stalling, thereby acting as a DNA damage sensor. Recognizes the substrate consensus sequence [ST]- Q. Phosphorylates histone H2A to form H2AS128ph (gamma-H2A) at sites of DNA damage, involved in the regulation of DNA damage response mechanism. Required for the control of telomere length and genome stability; Belongs to the PI3/PI4-kinase family. ATM subfamily. (2916 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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