STRINGSTRING
PV08_01079 PV08_01079 PV08_03815 PV08_03815 PV08_07587 PV08_07587 PV08_05766 PV08_05766 PV08_10350 PV08_10350 PV08_10280 PV08_10280 PV08_04361 PV08_04361 PV08_04231 PV08_04231 PV08_04550 PV08_04550 PV08_05793 PV08_05793 PV08_07820 PV08_07820 PV08_08616 PV08_08616 PV08_08190 PV08_08190 PV08_09060 PV08_09060 PV08_09055 PV08_09055 PV08_11376 PV08_11376 PV08_00928 PV08_00928 PV08_01928 PV08_01928 PV08_00223 PV08_00223
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_01079Uncharacterized protein. (1666 aa)
PV08_03815RING-box protein 1. (125 aa)
PV08_07587Uncharacterized protein. (1201 aa)
PV08_05766Uncharacterized protein. (244 aa)
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_10280PCI domain-containing protein. (487 aa)
PV08_04361Actin-related protein 8; Probably involved in transcription regulation via its interaction with the INO80 complex, a chromatin remodeling complex. Belongs to the actin family. (731 aa)
PV08_04231DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (536 aa)
PV08_04550MPN domain-containing protein. (416 aa)
PV08_05793RuvB-like helicase; DNA helicase participates in several chromatin remodeling complexes, including the SWR1 and the INO80 complexes. (456 aa)
PV08_07820PCI domain-containing protein. (312 aa)
PV08_08616BRCT domain-containing protein. (560 aa)
PV08_08190COP9 signalosome complex subunit 2. (505 aa)
PV08_09060Uncharacterized protein; Belongs to the actin family. (760 aa)
PV08_09055YL1_C domain-containing protein. (197 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_00928UV excision repair protein Rad23. (839 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_00223Polyubiquitin. (305 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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