136 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01793	Sec2p domain-containing protein. (274 aa)
	PV08_01257	Uncharacterized protein. (1242 aa)
	PV08_01552	Uncharacterized protein. (205 aa)
	PV08_08236	Uncharacterized protein. (739 aa)
	PV08_08171	WD_REPEATS_REGION domain-containing protein. (533 aa)
	PV08_00940	40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family. (146 aa)
	PV08_00680	Uncharacterized protein. (520 aa)
	PV08_03360	60S ribosomal protein L34-B. (116 aa)
	PV08_03280	BP28CT domain-containing protein. (1827 aa)
	PV08_03264	40S ribosomal protein S22; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	PV08_10941	Uncharacterized protein. (388 aa)
	PV08_03139	rRNA 2'-O-methyltransferase fibrillarin. (324 aa)
	PV08_02678	KH_dom_type_1 domain-containing protein. (246 aa)
	PV08_02481	WD_REPEATS_REGION domain-containing protein. (864 aa)
	PV08_11367	RTC domain-containing protein. (448 aa)
	PV08_11351	ATP-dependent rRNA helicase RRP3; Belongs to the DEAD box helicase family. (480 aa)
	PV08_04760	40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family. (162 aa)
	PV08_05063	Uncharacterized protein. (225 aa)
	PV08_04604	Uncharacterized protein. (345 aa)
	PV08_04933	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (122 aa)
	PV08_04446	Ribosomal_L28e domain-containing protein. (152 aa)
	PV08_11985	Uncharacterized protein. (1073 aa)
	PV08_04286	40S ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	PV08_04510	Uncharacterized protein. (306 aa)
	PV08_04474	Ipi1_N domain-containing protein. (331 aa)
	PV08_04394	40S ribosomal protein S17. (145 aa)
	PV08_03960	Uncharacterized protein. (379 aa)
	PV08_04284	Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. (124 aa)
	PV08_03828	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2. (765 aa)
	PV08_04093	ULP_PROTEASE domain-containing protein. (902 aa)
	PV08_06111	Bms1-type G domain-containing protein. (1179 aa)
	PV08_06289	Uncharacterized protein. (279 aa)
	PV08_06214	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (151 aa)
	PV08_06054	Uncharacterized protein. (549 aa)
	PV08_05699	Uncharacterized protein. (82 aa)
	PV08_05658	60S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (188 aa)
	PV08_05466	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (193 aa)
	ERB1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (781 aa)
	PV08_05298	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (203 aa)
	PV08_05238	Myb-like domain-containing protein. (578 aa)
	PV08_07650	Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family. (591 aa)
	PV08_07785	CP-type G domain-containing protein. (549 aa)
	PV08_06741	Bms1-type G domain-containing protein. (811 aa)
	PV08_06879	Protein kinase domain-containing protein. (294 aa)
	PV08_06749	Uncharacterized protein. (410 aa)
	PV08_06744	Utp12 domain-containing protein. (934 aa)
	PV08_08733	20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (442 aa)
	PV08_08767	ULP_PROTEASE domain-containing protein. (1289 aa)
	PV08_08317	Uncharacterized protein. (262 aa)
	PV08_08591	U3 small nucleolar ribonucleoprotein protein MPP10; Involved in nucleolar processing of pre-18S ribosomal RNA. Belongs to the MPP10 family. (743 aa)
	PV08_08180	Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (371 aa)
	PV08_09817	Nucleolar protein 58. (632 aa)
	PV08_09931	Sas10 domain-containing protein. (605 aa)
	PV08_09906	U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA. (290 aa)
	PV08_09625	Uncharacterized protein. (170 aa)
	PV08_09264	Uncharacterized protein. (382 aa)
	PV08_09459	Nop domain-containing protein. (517 aa)
	PV08_09454	KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly. (335 aa)
	PV08_11002	WD_REPEATS_REGION domain-containing protein. (984 aa)
	cnxG	Molybdopterin synthase sulfur carrier subunit; Acts as a sulfur carrier required for molybdopterin biosynthesis. Component of the molybdopterin synthase complex that catalyzes the conversion of precursor Z into molybdopterin by mediating the incorporation of 2 sulfur atoms into precursor Z to generate a dithiolene group. In the complex, serves as sulfur donor by being thiocarboxylated (-COSH) at its C-terminus by UBA4. After interaction with MOCS2B, the sulfur is then transferred to precursor Z to form molybdopterin. (141 aa)
	PV08_10608	S1 motif domain-containing protein. (350 aa)
	PV08_10418	HRDC domain-containing protein. (822 aa)
	PV08_10362	40S ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	PV08_10124	DRIM domain-containing protein. (2590 aa)
	PV08_10307	CLP1_P domain-containing protein. (635 aa)
	PV08_11404	WD_REPEATS_REGION domain-containing protein. (443 aa)
	PV08_11422	Uncharacterized protein. (386 aa)
	PV08_11766	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (200 aa)
	PV08_11984	Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (301 aa)
	PV08_01405	WD_REPEATS_REGION domain-containing protein. (990 aa)
	PV08_00617	Ribosomal RNA small subunit methyltransferase NEP1. (256 aa)
	PV08_00336	40S ribosomal protein S5; Belongs to the universal ribosomal protein uS7 family. (215 aa)
	PV08_05072	Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family. (85 aa)
	NOP7	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (681 aa)
	PV08_04977	40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family. (261 aa)
	PV08_04787	Pre-rRNA-processing protein PNO1. (260 aa)
	PV08_04666	WD_REPEATS_REGION domain-containing protein. (963 aa)
	PV08_04388	Uncharacterized protein. (1030 aa)
	PV08_04368	40S ribosomal protein S14; Belongs to the universal ribosomal protein uS11 family. (151 aa)
	PV08_04268	60S ribosomal protein L2-B. (254 aa)
	PV08_04238	WD_REPEATS_REGION domain-containing protein. (960 aa)
	PV08_04037	18S rRNA biogenesis protein RCL1. (406 aa)
	PV08_06133	WD_REPEATS_REGION domain-containing protein. (1505 aa)
	PV08_06038	Methyltransf_25 domain-containing protein. (227 aa)
	PV08_05197	S4 RNA-binding domain-containing protein. (431 aa)
	PV08_07854	40S ribosomal protein S19. (154 aa)
	PV08_06893	Uncharacterized protein. (938 aa)
	PV08_06728	RNase_PH domain-containing protein. (267 aa)
	PV08_08575	Uncharacterized protein. (459 aa)
	PV08_09644	Uncharacterized protein. (327 aa)
	PV08_10101	Uncharacterized protein. (291 aa)
	PV08_02021	Uncharacterized protein. (261 aa)
	PV08_01901	S4 RNA-binding domain-containing protein. (188 aa)
	PV08_01821	RNase_PH domain-containing protein. (309 aa)
	PV08_01665	Exonuclease domain-containing protein. (314 aa)
	PV08_03275	Uncharacterized protein. (703 aa)
	PV08_08617	Brix domain-containing protein. (296 aa)
	PV08_01564	Uncharacterized protein. (1823 aa)
	PV08_01815	RIO domain-containing protein. (382 aa)
	PV08_02020	Uncharacterized protein. (362 aa)
	SPB1	AdoMet-dependent rRNA methyltransferase SPB1; Required for proper assembly of pre-ribosomal particles during the biogenesis of the 60S ribosomal subunit; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. SPB1 subfamily. (830 aa)
	PV08_07273	WD_REPEATS_REGION domain-containing protein. (557 aa)
	PV08_07318	WD_REPEATS_REGION domain-containing protein. (603 aa)
	PV08_07766	U3 small nucleolar RNA-associated protein 22. (1121 aa)
	PV08_05545	40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family. (263 aa)
	PV08_06235	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (239 aa)
	PV08_04140	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (153 aa)
	PV08_04370	40S ribosomal protein S16; Belongs to the universal ribosomal protein uS9 family. (143 aa)
	PV08_04814	Uncharacterized protein. (273 aa)
	PV08_04914	PINc domain-containing protein. (194 aa)
	YTM1	Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (459 aa)
	PV08_03263	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (98 aa)
	PV08_03344	RNase_PH domain-containing protein. (258 aa)
	PV08_03447	40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family. (133 aa)
	PV08_03694	60S ribosomal protein L37a. (92 aa)
	PV08_00879	Uncharacterized protein. (513 aa)
	PV08_01089	RIX1 domain-containing protein. (782 aa)
	PV08_01205	RNase_PH domain-containing protein. (363 aa)
	RPS1	40S ribosomal protein S1; Belongs to the eukaryotic ribosomal protein eS1 family. (257 aa)
	PV08_04136	Uncharacterized protein. (900 aa)
	PV08_03935	Uncharacterized protein. (471 aa)
	PV08_03839	Uncharacterized protein. (155 aa)
	PV08_06556	Uncharacterized protein; Belongs to the DEAD box helicase family. (529 aa)
	PV08_06102	40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family. (261 aa)
	PV08_05472	Methyltransf_25 domain-containing protein. (236 aa)
	PV08_07878	WD_REPEATS_REGION domain-containing protein. (533 aa)
	PV08_07833	40S ribosomal protein S20. (116 aa)
	PV08_07365	Uncharacterized protein. (818 aa)
	PV08_06847	RNase_PH domain-containing protein. (369 aa)
	PV08_06657	CBF domain-containing protein. (287 aa)
	RPS0	40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (287 aa)
	PV08_11385	5'-3' exoribonuclease; Possesses 5'->3' exoribonuclease activity. May promote termination of transcription by RNA polymerase II. (1038 aa)
	PV08_11767	S10_plectin domain-containing protein. (162 aa)
	PV08_03155	Uncharacterized protein. (296 aa)
	PV08_04911	40S ribosomal protein S28. (68 aa)
	PV08_04670	WD_REPEATS_REGION domain-containing protein. (588 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ERB1	NOP7	A0A0D2B947	A0A0D1ZYX1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.999
ERB1	PV08_00617	A0A0D2B947	A0A0D2A5L6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Ribosomal RNA small subunit methyltransferase NEP1.	0.532
ERB1	PV08_00879	A0A0D2B947	A0A0D2C9P3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.919
ERB1	PV08_01089	A0A0D2B947	A0A0D2CAD8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	RIX1 domain-containing protein.	0.486
ERB1	PV08_01257	A0A0D2B947	A0A0D2BQA9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.634
ERB1	PV08_01405	A0A0D2B947	A0A0D2A7R1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.791
ERB1	PV08_01564	A0A0D2B947	A0A0D2BRE7	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.936
ERB1	PV08_01665	A0A0D2B947	A0A0D1Z0G8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Exonuclease domain-containing protein.	0.602
ERB1	PV08_01901	A0A0D2B947	A0A0D1Z0Z2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	S4 RNA-binding domain-containing protein.	0.632
ERB1	PV08_02020	A0A0D2B947	A0A0D2BSP0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.778
ERB1	PV08_02021	A0A0D2B947	A0A0D1Z1B6	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.781
ERB1	PV08_02481	A0A0D2B947	A0A0D2BGR1	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	WD_REPEATS_REGION domain-containing protein.	0.909
ERB1	PV08_03139	A0A0D2B947	A0A0D2BJT2	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	rRNA 2'-O-methyltransferase fibrillarin.	0.933
ERB1	PV08_03155	A0A0D2B947	A0A0D1YUD5	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.563
ERB1	PV08_03275	A0A0D2B947	A0A0D1YUR0	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.876
ERB1	PV08_03280	A0A0D2B947	A0A0D2BKA4	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	BP28CT domain-containing protein.	0.918
ERB1	PV08_03360	A0A0D2B947	A0A0D2BKI3	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L34-B.	0.924
ERB1	PV08_03694	A0A0D2B947	A0A0D2C761	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	60S ribosomal protein L37a.	0.753
ERB1	PV08_03828	A0A0D2B947	A0A0D2BDE9	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	U3 small nucleolar RNA-associated protein 25; DEAD-box RNA helicase-like protein required for pre-18S rRNA processing, specifically at sites A0, A1, and A2.	0.658
ERB1	PV08_03935	A0A0D2B947	A0A0D1YNQ8	Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	Uncharacterized protein.	0.642