31 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_10338	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events. (714 aa)
	PV08_09302	t-SNARE coiled-coil homology domain-containing protein. (247 aa)
	PV08_10891	N-acetyltransferase domain-containing protein. (218 aa)
	PV08_10485	Uncharacterized protein. (199 aa)
	PV08_11554	Uncharacterized protein. (589 aa)
	PV08_11176	V-SNARE coiled-coil homology domain-containing protein. (134 aa)
	PV08_01807	TMF_TATA_bd domain-containing protein. (819 aa)
	PV08_02520	COG2 domain-containing protein. (276 aa)
	PV08_04777	Sm domain-containing protein. (112 aa)
	PV08_10964	Uncharacterized protein. (264 aa)
	PV08_10076	Cog4 domain-containing protein. (788 aa)
	PV08_11963	RIC1 domain-containing protein. (1049 aa)
	PV08_04685	Uncharacterized protein. (245 aa)
	PV08_04362	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family. (175 aa)
	PV08_06877	Uncharacterized protein. (767 aa)
	PV08_09542	Uncharacterized protein. (771 aa)
	PV08_11167	Uncharacterized protein. (766 aa)
	PV08_03588	Uncharacterized protein. (83 aa)
	PV08_03523	Uncharacterized protein. (1460 aa)
	PV08_03872	Uncharacterized protein. (691 aa)
	PV08_07468	Uncharacterized protein. (292 aa)
	PV08_08707	Vps54 domain-containing protein. (1085 aa)
	PV08_01612	t-SNARE coiled-coil homology domain-containing protein. (294 aa)
	PV08_11316	Uncharacterized protein. (828 aa)
	PV08_04271	Vps53_N domain-containing protein. (877 aa)
	PV08_06176	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family. (376 aa)
	PV08_05681	t-SNARE coiled-coil homology domain-containing protein. (229 aa)
	PV08_07249	Uncharacterized protein. (665 aa)
	PV08_06809	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1452 aa)
	PV08_09178	Uncharacterized protein; Belongs to the helicase family. Dicer subfamily. (1567 aa)
	PV08_08052	Uncharacterized protein. (209 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_01612	PV08_02520	A0A0D2BQ27	A0A0D1ZZR8	t-SNARE coiled-coil homology domain-containing protein.	COG2 domain-containing protein.	0.635
PV08_01612	PV08_03523	A0A0D2BQ27	A0A0D2C6M0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.472
PV08_01612	PV08_03872	A0A0D2BQ27	A0A0D2BZD7	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.636
PV08_01612	PV08_04271	A0A0D2BQ27	A0A0D2BEQ8	t-SNARE coiled-coil homology domain-containing protein.	Vps53_N domain-containing protein.	0.827
PV08_01612	PV08_04362	A0A0D2BQ27	A0A0D1YPN5	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein; Belongs to the small GTPase superfamily. Arf family.	0.676
PV08_01612	PV08_05681	A0A0D2BQ27	A0A0D2B9K2	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.986
PV08_01612	PV08_06176	A0A0D2BQ27	A0A0D2BBY3	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein; Belongs to the syntaxin family.	0.963
PV08_01612	PV08_07249	A0A0D2BQ27	A0A0D2B711	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.808
PV08_01612	PV08_07468	A0A0D2BQ27	A0A0D2BTU8	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.960
PV08_01612	PV08_08052	A0A0D2BQ27	A0A0D2B2M3	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.786
PV08_01612	PV08_08707	A0A0D2BQ27	A0A0D2BQV3	t-SNARE coiled-coil homology domain-containing protein.	Vps54 domain-containing protein.	0.811
PV08_01612	PV08_09302	A0A0D2BQ27	A0A0D2AZE0	t-SNARE coiled-coil homology domain-containing protein.	t-SNARE coiled-coil homology domain-containing protein.	0.763
PV08_01612	PV08_10076	A0A0D2BQ27	A0A0D1ZCK9	t-SNARE coiled-coil homology domain-containing protein.	Cog4 domain-containing protein.	0.732
PV08_01612	PV08_10338	A0A0D2BQ27	A0A0D2BI75	t-SNARE coiled-coil homology domain-containing protein.	Conserved oligomeric Golgi complex subunit 6; Acts as component of the peripheral membrane COG complex that is involved in intra-Golgi protein trafficking. COG is located at the cis-Golgi, and regulates tethering of retrograde intra-Golgi vesicles and possibly a number of other membrane trafficking events.	0.768
PV08_01612	PV08_10964	A0A0D2BQ27	A0A0D1ZF85	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.660
PV08_01612	PV08_11167	A0A0D2BQ27	A0A0D1Y5K0	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.691
PV08_01612	PV08_11176	A0A0D2BQ27	A0A0D2AUN6	t-SNARE coiled-coil homology domain-containing protein.	V-SNARE coiled-coil homology domain-containing protein.	0.968
PV08_01612	PV08_11316	A0A0D2BQ27	A0A0D2BG63	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.878
PV08_01612	PV08_11554	A0A0D2BQ27	A0A0D2AVX6	t-SNARE coiled-coil homology domain-containing protein.	Uncharacterized protein.	0.748
PV08_01612	PV08_11963	A0A0D2BQ27	A0A0D1ZA10	t-SNARE coiled-coil homology domain-containing protein.	RIC1 domain-containing protein.	0.656