57 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_00579	Uncharacterized protein. (568 aa)
	PV08_00559	Uncharacterized protein. (855 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_00207	CAP-Gly domain-containing protein. (805 aa)
	PV08_00041	Uncharacterized protein. (409 aa)
	PV08_05979	Uncharacterized protein. (919 aa)
	PV08_02128	Uncharacterized protein. (1680 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)
	PV08_01383	Uncharacterized protein. (451 aa)
	PV08_01358	Uncharacterized protein. (851 aa)
	PV08_08261	Tubulin beta chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (448 aa)
	PV08_00958	Uncharacterized protein. (615 aa)
	PV08_09786	Uncharacterized protein. (765 aa)
	PV08_00262	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (450 aa)
	PV08_00176	Uncharacterized protein. (1363 aa)
	PV08_10419	Uncharacterized protein. (219 aa)
	PV08_02621	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (461 aa)
	PV08_11730	Uncharacterized protein. (173 aa)
	PV08_11950	Uncharacterized protein. (247 aa)
	PV08_05451	Uncharacterized protein. (246 aa)
	PV08_05258	Magnesium-dependent phosphatase-1. (267 aa)
	PV08_08260	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (929 aa)
	PV08_08105	Ubiquitin-like domain-containing protein. (101 aa)
	PV08_10778	ELYS domain-containing protein. (308 aa)
	PV08_10563	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	PV08_11240	WAPL domain-containing protein. (882 aa)
	PV08_11941	Uncharacterized protein. (1346 aa)
	PV08_00216	Uncharacterized protein. (1126 aa)
	PV08_03369	Kinesin motor domain-containing protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family. (1008 aa)
	PV08_02946	Uncharacterized protein. (500 aa)
	PV08_02911	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	PV08_06073	Uncharacterized protein. (485 aa)
	PV08_05737	Uncharacterized protein. (716 aa)
	PV08_07692	NUDE_C domain-containing protein. (609 aa)
	PV08_08289	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (349 aa)
	PV08_08094	Nup188_C domain-containing protein. (1820 aa)
	PV08_09231	DHR10 domain-containing protein. (458 aa)
	PV08_09130	Uncharacterized protein. (225 aa)
	PV08_10356	AAA domain-containing protein. (806 aa)
	PV08_11803	Uncharacterized protein. (660 aa)
	PV08_11988	Uncharacterized protein. (681 aa)
	PV08_11903	Uncharacterized protein. (213 aa)
	PV08_02166	Uncharacterized protein. (220 aa)
	PV08_02086	Uncharacterized protein. (507 aa)
	PV08_01966	Uncharacterized protein. (370 aa)
	PV08_01449	Uncharacterized protein. (414 aa)
	PV08_00641	Peptidase C50 domain-containing protein. (2052 aa)
	PV08_03190	Importin N-terminal domain-containing protein. (871 aa)
	PV08_02739	Uncharacterized protein. (737 aa)
	PV08_02464	Metallophos domain-containing protein. (427 aa)
	PV08_02363	Tubulin alpha chain; Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain. (451 aa)
	PV08_05771	Peptidase S59 domain-containing protein. (1820 aa)
	PV08_08812	Uncharacterized protein. (637 aa)
	PV08_07993	Uncharacterized protein. (1244 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_10265	Uncharacterized protein; Belongs to the AAA ATPase family. (436 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00041	PV08_02086	A0A0D2C7E4	A0A0D1Z1K2	Uncharacterized protein.	Uncharacterized protein.	0.881
PV08_00041	PV08_02166	A0A0D2C7E4	A0A0D1Z1R0	Uncharacterized protein.	Uncharacterized protein.	0.938
PV08_00041	PV08_05258	A0A0D2C7E4	A0A0D2B8F2	Uncharacterized protein.	Magnesium-dependent phosphatase-1.	0.637
PV08_00041	PV08_09130	A0A0D2C7E4	A0A0D1ZFU0	Uncharacterized protein.	Uncharacterized protein.	0.934
PV08_00041	PV08_10265	A0A0D2C7E4	A0A0D1Y7S4	Uncharacterized protein.	Uncharacterized protein; Belongs to the AAA ATPase family.	0.985
PV08_00041	PV08_10356	A0A0D2C7E4	A0A0D1ZDK9	Uncharacterized protein.	AAA domain-containing protein.	0.946
PV08_00041	PV08_10419	A0A0D2C7E4	A0A0D2BID2	Uncharacterized protein.	Uncharacterized protein.	0.967
PV08_00041	PV08_11903	A0A0D2C7E4	A0A0D1Z9W0	Uncharacterized protein.	Uncharacterized protein.	0.903
PV08_00176	PV08_00216	A0A0D2BKY2	A0A0D2A470	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_00559	A0A0D2BKY2	A0A0D2C8X0	Uncharacterized protein.	Uncharacterized protein.	0.843
PV08_00176	PV08_01449	A0A0D2BKY2	A0A0D1YZX3	Uncharacterized protein.	Uncharacterized protein.	0.843
PV08_00176	PV08_02128	A0A0D2BKY2	A0A0D2BR97	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_02621	A0A0D2BKY2	A0A0D2BH63	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.994
PV08_00176	PV08_02911	A0A0D2BKY2	A0A0D2A0X4	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.754
PV08_00176	PV08_02946	A0A0D2BKY2	A0A0D2A106	Uncharacterized protein.	Uncharacterized protein.	0.945
PV08_00176	PV08_03190	A0A0D2BKY2	A0A0D1YUG7	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.681
PV08_00176	PV08_05737	A0A0D2BKY2	A0A0D1ZS93	Uncharacterized protein.	Uncharacterized protein.	0.595
PV08_00176	PV08_05771	A0A0D2BKY2	A0A0D1YL06	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
PV08_00176	PV08_07993	A0A0D2BKY2	A0A0D1YCW7	Uncharacterized protein.	Uncharacterized protein.	0.987
PV08_00176	PV08_08094	A0A0D2BKY2	A0A0D1ZJ83	Uncharacterized protein.	Nup188_C domain-containing protein.	0.956