10 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_11376	BZIP domain-containing protein. (465 aa)
	PV08_03815	RING-box protein 1. (125 aa)
	PV08_06113	AAA domain-containing protein. (477 aa)
	PV08_09210	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (746 aa)
	PV08_01966	Uncharacterized protein. (370 aa)
	PV08_08887	Uncharacterized protein. (410 aa)
	PV08_10350	Ubiquitin-40S ribosomal protein S27a. (154 aa)
	PV08_00223	Polyubiquitin. (305 aa)
	PV08_03173	Uncharacterized protein. (456 aa)
	PV08_01928	Ubiquitin-like domain-containing protein. (592 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00223	PV08_01928	A0A0D2C7U5	A0A0D2BQS0	Polyubiquitin.	Ubiquitin-like domain-containing protein.	0.835
PV08_00223	PV08_01966	A0A0D2C7U5	A0A0D1Z151	Polyubiquitin.	Uncharacterized protein.	0.685
PV08_00223	PV08_03173	A0A0D2C7U5	A0A0D2C5P2	Polyubiquitin.	Uncharacterized protein.	0.647
PV08_00223	PV08_03815	A0A0D2C7U5	A0A0D1ZV76	Polyubiquitin.	RING-box protein 1.	0.936
PV08_00223	PV08_06113	A0A0D2C7U5	A0A0D1ZTG9	Polyubiquitin.	AAA domain-containing protein.	0.843
PV08_00223	PV08_09210	A0A0D2C7U5	A0A0D1ZG34	Polyubiquitin.	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.	0.676
PV08_00223	PV08_10350	A0A0D2C7U5	A0A0D1Y801	Polyubiquitin.	Ubiquitin-40S ribosomal protein S27a.	0.968
PV08_00223	PV08_11376	A0A0D2C7U5	A0A0D2AUK8	Polyubiquitin.	BZIP domain-containing protein.	0.961
PV08_01928	PV08_00223	A0A0D2BQS0	A0A0D2C7U5	Ubiquitin-like domain-containing protein.	Polyubiquitin.	0.835
PV08_01928	PV08_01966	A0A0D2BQS0	A0A0D1Z151	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.658
PV08_01928	PV08_03173	A0A0D2BQS0	A0A0D2C5P2	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.651
PV08_01928	PV08_03815	A0A0D2BQS0	A0A0D1ZV76	Ubiquitin-like domain-containing protein.	RING-box protein 1.	0.867
PV08_01928	PV08_06113	A0A0D2BQS0	A0A0D1ZTG9	Ubiquitin-like domain-containing protein.	AAA domain-containing protein.	0.852
PV08_01928	PV08_09210	A0A0D2BQS0	A0A0D1ZG34	Ubiquitin-like domain-containing protein.	Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication.	0.671
PV08_01966	PV08_00223	A0A0D1Z151	A0A0D2C7U5	Uncharacterized protein.	Polyubiquitin.	0.685
PV08_01966	PV08_01928	A0A0D1Z151	A0A0D2BQS0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.658
PV08_01966	PV08_03173	A0A0D1Z151	A0A0D2C5P2	Uncharacterized protein.	Uncharacterized protein.	0.659
PV08_01966	PV08_06113	A0A0D1Z151	A0A0D1ZTG9	Uncharacterized protein.	AAA domain-containing protein.	0.660
PV08_01966	PV08_10350	A0A0D1Z151	A0A0D1Y801	Uncharacterized protein.	Ubiquitin-40S ribosomal protein S27a.	0.661
PV08_01966	PV08_11376	A0A0D1Z151	A0A0D2AUK8	Uncharacterized protein.	BZIP domain-containing protein.	0.661