STRINGSTRING
PV08_08708 PV08_08708 PV08_10350 PV08_10350 PV08_09008 PV08_09008 PV08_09462 PV08_09462 PV08_07983 PV08_07983 PV08_08887 PV08_08887 PV08_01969 PV08_01969 PV08_00223 PV08_00223 PV08_03568 PV08_03568 PV08_03173 PV08_03173 PV08_08985 PV08_08985 PV08_08681 PV08_08681 PV08_08117 PV08_08117 PV08_08110 PV08_08110 PV08_09216 PV08_09216 PV08_11542 PV08_11542 PV08_11376 PV08_11376 PV08_02032 PV08_02032 PV08_01626 PV08_01626 PV08_00922 PV08_00922 PV08_00437 PV08_00437 PV08_04726 PV08_04726 PV08_03815 PV08_03815 PV08_06173 PV08_06173 PV08_06113 PV08_06113 PV08_06808 PV08_06808 PV08_08289 PV08_08289 PV08_09210 PV08_09210 PV08_10742 PV08_10742 PV08_01966 PV08_01966 PV08_01600 PV08_01600 PV08_03721 PV08_03721 PV08_04695 PV08_04695 PV08_07325 PV08_07325 PV08_06972 PV08_06972 PV08_03043 PV08_03043 PV08_02547 PV08_02547 PV08_05999 PV08_05999 PV08_07544 PV08_07544 PV08_06790 PV08_06790 PV08_01684 PV08_01684 PV08_01634 PV08_01634 PV08_02143 PV08_02143 PV08_01928 PV08_01928 PV08_01768 PV08_01768 PV08_10007 PV08_10007 FEN1 FEN1 PV08_00828 PV08_00828 PV08_00287 PV08_00287 PV08_10203 PV08_10203 PV08_10128 PV08_10128 MCM7 MCM7 PV08_04795 PV08_04795 PV08_11884 PV08_11884 PV08_04399 PV08_04399 PV08_04254 PV08_04254 PV08_04244 PV08_04244 PV08_06286 PV08_06286 PV08_05860 PV08_05860 PV08_06028 PV08_06028 PV08_05603 PV08_05603 PV08_05250 PV08_05250 PV08_07817 PV08_07817 PV08_07539 PV08_07539 PV08_07653 PV08_07653 PV08_06610 PV08_06610
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_08708DNA helicase; Belongs to the MCM family. (724 aa)
PV08_10350Ubiquitin-40S ribosomal protein S27a. (154 aa)
PV08_09008CCHC-type domain-containing protein. (938 aa)
PV08_09462DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2235 aa)
PV08_07983Uncharacterized protein. (151 aa)
PV08_08887Uncharacterized protein. (410 aa)
PV08_01969CCHC-type domain-containing protein. (393 aa)
PV08_00223Polyubiquitin. (305 aa)
PV08_03568DNA ligase. (881 aa)
PV08_03173Uncharacterized protein. (456 aa)
PV08_08985HTH myb-type domain-containing protein. (556 aa)
PV08_08681DNA_LIGASE_A3 domain-containing protein. (1257 aa)
PV08_08117Uncharacterized protein. (1653 aa)
PV08_08110Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (448 aa)
PV08_09216Uncharacterized protein. (226 aa)
PV08_11542XPGI domain-containing protein. (755 aa)
PV08_11376BZIP domain-containing protein. (465 aa)
PV08_02032DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (655 aa)
PV08_01626Uncharacterized protein. (111 aa)
PV08_00922Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (115 aa)
PV08_00437DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family. (244 aa)
PV08_04726Cell division control protein; Belongs to the CDC6/cdc18 family. (599 aa)
PV08_03815RING-box protein 1. (125 aa)
PV08_06173Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
PV08_06113AAA domain-containing protein. (477 aa)
PV08_06808Replication factor C subunit 5. (354 aa)
PV08_08289UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (349 aa)
PV08_09210Origin recognition complex subunit 1; Component of the origin recognition complex (ORC) that binds origins of replication. DNA-binding is ATP-dependent, however specific DNA sequences that define origins of replication have not been identified so far. ORC is required to assemble the pre-replication complex necessary to initiate DNA replication. (746 aa)
PV08_10742DNA primase; Belongs to the eukaryotic-type primase small subunit family. (526 aa)
PV08_01966Uncharacterized protein. (370 aa)
PV08_01600DNA polymerase. (1107 aa)
PV08_03721Uncharacterized protein. (265 aa)
PV08_04695Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (414 aa)
PV08_07325DNA ligase. (866 aa)
PV08_06972DNA helicase; Belongs to the MCM family. (899 aa)
PV08_03043Sld5 domain-containing protein. (234 aa)
PV08_02547AAA domain-containing protein. (407 aa)
PV08_05999Serine/threonine-protein kinase pef1; Belongs to the protein kinase superfamily. (338 aa)
PV08_07544Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (220 aa)
PV08_06790Replication factor C subunit 1. (1080 aa)
PV08_01684AAA domain-containing protein. (1093 aa)
PV08_01634Cyclin N-terminal domain-containing protein; Belongs to the cyclin family. (680 aa)
PV08_02143Uncharacterized protein. (581 aa)
PV08_01928Ubiquitin-like domain-containing protein. (592 aa)
PV08_01768CBFD_NFYB_HMF domain-containing protein. (188 aa)
PV08_10007Uncharacterized protein. (134 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (395 aa)
PV08_00828DNA polymerase. (1451 aa)
PV08_00287AAA domain-containing protein. (413 aa)
PV08_10203Uncharacterized protein. (518 aa)
PV08_10128DNA replication complex GINS protein SLD5; The GINS complex plays an essential role in the initiation of DNA replication; Belongs to the GINS4/SLD5 family. (275 aa)
MCM7DNA replication licensing factor MCM7; Acts as component of the mcm2-7 complex (mcm complex) which is the putative replicative helicase essential for 'once per cell cycle' DNA replication initiation and elongation in eukaryotic cells. The active ATPase sites in the mcm2-7 ring are formed through the interaction surfaces of two neighboring subunits such that a critical structure of a conserved arginine finger motif is provided in trans relative to the ATP-binding site of the Walker A box of the adjacent subunit. The six ATPase active sites, however, are likely to contribute differential [...] (815 aa)
PV08_04795Uncharacterized protein. (510 aa)
PV08_11884Amino_oxidase domain-containing protein. (534 aa)
PV08_04399Replication factor C subunit 4. (352 aa)
PV08_04254DNA helicase; Belongs to the MCM family. (947 aa)
PV08_04244DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (503 aa)
PV08_06286Zds_C domain-containing protein. (916 aa)
PV08_05860Cyclin-dependent kinase 1; Belongs to the protein kinase superfamily. (328 aa)
PV08_06028DNA helicase; Belongs to the MCM family. (849 aa)
PV08_05603Uncharacterized protein. (165 aa)
PV08_05250Sld5 domain-containing protein. (181 aa)
PV08_07817CBFD_NFYB_HMF domain-containing protein. (340 aa)
PV08_07539Vezatin domain-containing protein. (586 aa)
PV08_07653DNA helicase; Belongs to the MCM family. (1005 aa)
PV08_06610DNA_pol_E_B domain-containing protein. (842 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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