STRINGSTRING
PV08_09371 PV08_09371 PV08_03996 PV08_03996 PV08_03789 PV08_03789 PV08_05806 PV08_05806 PV08_09144 PV08_09144 PV08_03538 PV08_03538 PV08_03406 PV08_03406 PV08_05739 PV08_05739 PV08_00244 PV08_00244 PV08_02631 PV08_02631 PV08_11170 PV08_11170 PV08_08841 PV08_08841 PV08_09098 PV08_09098 PV08_11207 PV08_11207 CLP1 CLP1 PV08_00657 PV08_00657 PV08_04228 PV08_04228 PV08_07627 PV08_07627
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PV08_09371Uncharacterized protein. (606 aa)
PV08_03996Uncharacterized protein. (348 aa)
PV08_03789Cleavage and polyadenylation specificity factor subunit 2. (942 aa)
PV08_05806RRM domain-containing protein. (293 aa)
PV08_09144Uncharacterized protein. (286 aa)
PV08_03538Uncharacterized protein. (847 aa)
PV08_03406Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (611 aa)
PV08_05739WD_REPEATS_REGION domain-containing protein. (671 aa)
PV08_00244DUF3453 domain-containing protein. (761 aa)
PV08_02631RRM domain-containing protein. (204 aa)
PV08_11170Suf domain-containing protein. (1026 aa)
PV08_08841CID domain-containing protein. (646 aa)
PV08_09098Fip1 domain-containing protein. (353 aa)
PV08_11207Uncharacterized protein. (842 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (503 aa)
PV08_00657Uncharacterized protein. (245 aa)
PV08_04228CPSF_A domain-containing protein. (1359 aa)
PV08_07627Nuclear cap-binding protein subunit 2. (180 aa)
Your Current Organism:
Exophiala spinifera
NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera
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