43 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_05339	Uncharacterized protein. (770 aa)
	PV08_04430	Uncharacterized protein. (994 aa)
	PV08_03558	Uncharacterized protein. (376 aa)
	PV08_02104	Uncharacterized protein. (282 aa)
	PV08_07242	Uncharacterized protein. (704 aa)
	PV08_07822	Uncharacterized protein. (428 aa)
	PV08_06475	BTB domain-containing protein. (972 aa)
	PV08_01340	RNA_pol_L_2 domain-containing protein. (243 aa)
	PV08_00612	S1 domain-containing protein. (167 aa)
	PV08_11287	Flavin_Reduct domain-containing protein. (329 aa)
	PV08_09062	RPOLD domain-containing protein. (334 aa)
	PV08_11625	TATA-box-binding protein. (306 aa)
	PV08_09758	Serine/threonine-protein phosphatase. (479 aa)
	PV08_09854	Methyltranfer_dom domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Protein arginine N-methyltransferase family. (356 aa)
	PV08_08398	Uncharacterized protein. (74 aa)
	PV08_03341	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1294 aa)
	PV08_01951	Uncharacterized protein. (827 aa)
	PV08_01986	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (113 aa)
	PV08_11319	Uncharacterized protein; Belongs to the cyclin family. (506 aa)
	PV08_09341	Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (1171 aa)
	PV08_08139	Uncharacterized protein. (384 aa)
	PV08_03302	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1772 aa)
	cprA	NADPH--cytochrome P450 reductase; This enzyme is required for electron transfer from NADP to cytochrome P450 in microsomes. It can also provide electron transfer to heme oxygenase and cytochrome B5. Involved in ergosterol biosynthesis. In the C-terminal section; belongs to the flavoprotein pyridine nucleotide cytochrome reductase family. (691 aa)
	PV08_09898	Uncharacterized protein. (238 aa)
	PV08_06954	Protein GZF3. (279 aa)
	PV08_01987	Uncharacterized protein. (343 aa)
	PV08_11146	Serine/threonine-protein kinase bur1. (655 aa)
	PV08_04098	Fork-head domain-containing protein. (721 aa)
	PV08_04476	GATA-type domain-containing protein. (985 aa)
	PV08_10118	Protein kinase domain-containing protein. (266 aa)
	PV08_10214	Histone H2B; Belongs to the histone H2B family. (141 aa)
	PV08_09080	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	PV08_02766	Protein kinase domain-containing protein. (861 aa)
	PV08_11001	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (86 aa)
	PV08_00518	RPOL4c domain-containing protein. (152 aa)
	PV08_00613	Uncharacterized protein. (529 aa)
	PV08_00823	ATP-dependent RNA helicase dbp2; Belongs to the DEAD box helicase family. (528 aa)
	PV08_00705	Uncharacterized protein. (152 aa)
	PV08_00745	Hsp90-like protein. (702 aa)
	PV08_01150	Uncharacterized protein. (409 aa)
	PV08_01657	Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family. (554 aa)
	PV08_07136	CYCLIN domain-containing protein; Belongs to the cyclin family. (410 aa)
	PV08_02105	Uncharacterized protein. (192 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00518	PV08_00612	A0A0D2BLX8	A0A0D2A5L2	RPOL4c domain-containing protein.	S1 domain-containing protein.	0.999
PV08_00518	PV08_00613	A0A0D2BLX8	A0A0D2BMA0	RPOL4c domain-containing protein.	Uncharacterized protein.	0.973
PV08_00518	PV08_00705	A0A0D2BLX8	A0A0D2BNM3	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
PV08_00518	PV08_01340	A0A0D2BLX8	A0A0D2A7J8	RPOL4c domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.999
PV08_00518	PV08_01986	A0A0D2BLX8	A0A0D1Z171	RPOL4c domain-containing protein.	Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family.	0.946
PV08_00518	PV08_01987	A0A0D2BLX8	A0A0D2A9G3	RPOL4c domain-containing protein.	Uncharacterized protein.	0.946
PV08_00518	PV08_03302	A0A0D2BLX8	A0A0D2A281	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PV08_00518	PV08_03341	A0A0D2BLX8	A0A0D1YUW7	RPOL4c domain-containing protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
PV08_00518	PV08_03558	A0A0D2BLX8	A0A0D2C6Q5	RPOL4c domain-containing protein.	Uncharacterized protein.	0.964
PV08_00518	PV08_06475	A0A0D2BLX8	A0A0D2BBN4	RPOL4c domain-containing protein.	BTB domain-containing protein.	0.947
PV08_00518	PV08_07242	A0A0D2BLX8	A0A0D2B6H1	RPOL4c domain-containing protein.	Uncharacterized protein.	0.987
PV08_00518	PV08_08139	A0A0D2BLX8	A0A0D1ZJF2	RPOL4c domain-containing protein.	Uncharacterized protein.	0.987
PV08_00518	PV08_08398	A0A0D2BLX8	A0A0D1YDS8	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
PV08_00518	PV08_09062	A0A0D2BLX8	A0A0D2AZ98	RPOL4c domain-containing protein.	RPOLD domain-containing protein.	0.999
PV08_00518	PV08_09080	A0A0D2BLX8	A0A0D2AYL3	RPOL4c domain-containing protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
PV08_00518	PV08_09898	A0A0D2BLX8	A0A0D2B1Z3	RPOL4c domain-containing protein.	Uncharacterized protein.	0.999
PV08_00518	PV08_10214	A0A0D2BLX8	A0A0D2AWU6	RPOL4c domain-containing protein.	Histone H2B; Belongs to the histone H2B family.	0.947
PV08_00518	PV08_11001	A0A0D2BLX8	A0A0D2BK91	RPOL4c domain-containing protein.	DNA-directed RNA polymerase I, II, and III subunit RPABC5.	0.999
PV08_00518	PV08_11146	A0A0D2BLX8	A0A0D2AUK4	RPOL4c domain-containing protein.	Serine/threonine-protein kinase bur1.	0.664
PV08_00518	PV08_11625	A0A0D2BLX8	A0A0D1Y6Z8	RPOL4c domain-containing protein.	TATA-box-binding protein.	0.977