20 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01383	Uncharacterized protein. (451 aa)
	PV08_00579	Uncharacterized protein. (568 aa)
	PV08_00559	Uncharacterized protein. (855 aa)
	PV08_02128	Uncharacterized protein. (1680 aa)
	PV08_00176	Uncharacterized protein. (1363 aa)
	PV08_02621	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family. (461 aa)
	PV08_08260	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). (929 aa)
	PV08_08105	Ubiquitin-like domain-containing protein. (101 aa)
	PV08_10778	ELYS domain-containing protein. (308 aa)
	PV08_10563	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family. (217 aa)
	PV08_11941	Uncharacterized protein. (1346 aa)
	PV08_00216	Uncharacterized protein. (1126 aa)
	PV08_02946	Uncharacterized protein. (500 aa)
	PV08_02911	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family. (157 aa)
	PV08_08094	Nup188_C domain-containing protein. (1820 aa)
	PV08_11803	Uncharacterized protein. (660 aa)
	PV08_11988	Uncharacterized protein. (681 aa)
	PV08_01449	Uncharacterized protein. (414 aa)
	PV08_05771	Peptidase S59 domain-containing protein. (1820 aa)
	PV08_07993	Uncharacterized protein. (1244 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00176	PV08_00216	A0A0D2BKY2	A0A0D2A470	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_00559	A0A0D2BKY2	A0A0D2C8X0	Uncharacterized protein.	Uncharacterized protein.	0.843
PV08_00176	PV08_01449	A0A0D2BKY2	A0A0D1YZX3	Uncharacterized protein.	Uncharacterized protein.	0.843
PV08_00176	PV08_02128	A0A0D2BKY2	A0A0D2BR97	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00176	PV08_02621	A0A0D2BKY2	A0A0D2BH63	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein; Belongs to the WD repeat SEC13 family.	0.994
PV08_00176	PV08_02911	A0A0D2BKY2	A0A0D2A0X4	Uncharacterized protein.	SUMO-conjugating enzyme ubc9; Belongs to the ubiquitin-conjugating enzyme family.	0.754
PV08_00176	PV08_02946	A0A0D2BKY2	A0A0D2A106	Uncharacterized protein.	Uncharacterized protein.	0.945
PV08_00176	PV08_05771	A0A0D2BKY2	A0A0D1YL06	Uncharacterized protein.	Peptidase S59 domain-containing protein.	0.998
PV08_00176	PV08_07993	A0A0D2BKY2	A0A0D1YCW7	Uncharacterized protein.	Uncharacterized protein.	0.987
PV08_00176	PV08_08094	A0A0D2BKY2	A0A0D1ZJ83	Uncharacterized protein.	Nup188_C domain-containing protein.	0.956
PV08_00176	PV08_08105	A0A0D2BKY2	A0A0D2B1Z0	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.656
PV08_00176	PV08_08260	A0A0D2BKY2	A0A0D2B2F3	Uncharacterized protein.	Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).	0.991
PV08_00176	PV08_10563	A0A0D2BKY2	A0A0D2AX25	Uncharacterized protein.	GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.	0.684
PV08_00176	PV08_10778	A0A0D2BKY2	A0A0D2AXS0	Uncharacterized protein.	ELYS domain-containing protein.	0.973
PV08_00176	PV08_11803	A0A0D2BKY2	A0A0D1ZAL5	Uncharacterized protein.	Uncharacterized protein.	0.945
PV08_00176	PV08_11941	A0A0D2BKY2	A0A0D2ATJ2	Uncharacterized protein.	Uncharacterized protein.	0.991
PV08_00176	PV08_11988	A0A0D2BKY2	A0A0D1ZA39	Uncharacterized protein.	Uncharacterized protein.	0.543
PV08_00216	PV08_00176	A0A0D2A470	A0A0D2BKY2	Uncharacterized protein.	Uncharacterized protein.	0.999
PV08_00216	PV08_00559	A0A0D2A470	A0A0D2C8X0	Uncharacterized protein.	Uncharacterized protein.	0.759
PV08_00216	PV08_00579	A0A0D2A470	A0A0D2C912	Uncharacterized protein.	Uncharacterized protein.	0.677