(20 nodes) Short chain dehydrogenase network (Exophiala spinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_10125	Uncharacterized protein. (311 aa)
	PV08_02693	Uncharacterized protein. (631 aa)
	PV08_03861	Uncharacterized protein. (299 aa)
	PV08_10593	Uncharacterized protein. (290 aa)
	PV08_11627	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (291 aa)
	PV08_11719	Uncharacterized protein. (270 aa)
	PV08_11888	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (272 aa)
	PV08_02002	Uncharacterized protein. (341 aa)
	PV08_02058	Uncharacterized protein. (274 aa)
	PV08_08794	Uncharacterized protein. (248 aa)
	PV08_01430	MaoC-like domain-containing protein. (906 aa)
	PV08_00377	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (323 aa)
	PV08_07914	Uncharacterized protein. (352 aa)
	PV08_00053	Peroxisomal hydratase-dehydrogenase-epimerase. (901 aa)
	PV08_00008	MFS domain-containing protein. (654 aa)
	PV08_03296	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (278 aa)
	PV08_04167	Uncharacterized protein. (903 aa)
	PV08_07240	Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (384 aa)
	PV08_00530	Uncharacterized protein. (281 aa)
	PV08_01833	Uncharacterized protein. (274 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00053	PV08_01833	A0A0D1YW46	A0A0D2BQJ2	Peroxisomal hydratase-dehydrogenase-epimerase.	Uncharacterized protein.	0.411
PV08_00053	PV08_10125	A0A0D1YW46	A0A0D1Y7D7	Peroxisomal hydratase-dehydrogenase-epimerase.	Uncharacterized protein.	0.411
PV08_00053	PV08_10593	A0A0D1YW46	A0A0D2AX53	Peroxisomal hydratase-dehydrogenase-epimerase.	Uncharacterized protein.	0.548
PV08_01430	PV08_01833	A0A0D2A7T6	A0A0D2BQJ2	MaoC-like domain-containing protein.	Uncharacterized protein.	0.411
PV08_01430	PV08_10125	A0A0D2A7T6	A0A0D1Y7D7	MaoC-like domain-containing protein.	Uncharacterized protein.	0.411
PV08_01430	PV08_10593	A0A0D2A7T6	A0A0D2AX53	MaoC-like domain-containing protein.	Uncharacterized protein.	0.548
PV08_01833	PV08_00053	A0A0D2BQJ2	A0A0D1YW46	Uncharacterized protein.	Peroxisomal hydratase-dehydrogenase-epimerase.	0.411
PV08_01833	PV08_01430	A0A0D2BQJ2	A0A0D2A7T6	Uncharacterized protein.	MaoC-like domain-containing protein.	0.411
PV08_01833	PV08_04167	A0A0D2BQJ2	A0A0D1YP88	Uncharacterized protein.	Uncharacterized protein.	0.411
PV08_04167	PV08_01833	A0A0D1YP88	A0A0D2BQJ2	Uncharacterized protein.	Uncharacterized protein.	0.411
PV08_04167	PV08_10125	A0A0D1YP88	A0A0D1Y7D7	Uncharacterized protein.	Uncharacterized protein.	0.411
PV08_04167	PV08_10593	A0A0D1YP88	A0A0D2AX53	Uncharacterized protein.	Uncharacterized protein.	0.548
PV08_10125	PV08_00053	A0A0D1Y7D7	A0A0D1YW46	Uncharacterized protein.	Peroxisomal hydratase-dehydrogenase-epimerase.	0.411
PV08_10125	PV08_01430	A0A0D1Y7D7	A0A0D2A7T6	Uncharacterized protein.	MaoC-like domain-containing protein.	0.411
PV08_10125	PV08_04167	A0A0D1Y7D7	A0A0D1YP88	Uncharacterized protein.	Uncharacterized protein.	0.411
PV08_10593	PV08_00053	A0A0D2AX53	A0A0D1YW46	Uncharacterized protein.	Peroxisomal hydratase-dehydrogenase-epimerase.	0.548
PV08_10593	PV08_01430	A0A0D2AX53	A0A0D2A7T6	Uncharacterized protein.	MaoC-like domain-containing protein.	0.548
PV08_10593	PV08_04167	A0A0D2AX53	A0A0D1YP88	Uncharacterized protein.	Uncharacterized protein.	0.548