(20 nodes) Acyl-CoA dehydrogenase, N-terminal domain network (Exophiala spinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_09608	Uncharacterized protein. (422 aa)
	PV08_05821	Uncharacterized protein. (427 aa)
	PV08_04412	Uncharacterized protein. (432 aa)
	PV08_01273	Uncharacterized protein. (460 aa)
	PV08_01319	Cytochrome b5 heme-binding domain-containing protein. (541 aa)
	PV08_08234	Uncharacterized protein. (426 aa)
	PV08_05302	Uncharacterized protein. (471 aa)
	PV08_01007	Uncharacterized protein. (425 aa)
	PV08_10247	Uncharacterized protein. (426 aa)
	PV08_09687	Cytochrome b5 heme-binding domain-containing protein. (522 aa)
	PV08_08370	Uncharacterized protein. (443 aa)
	PV08_07543	Uncharacterized protein. (456 aa)
	PV08_07717	Uncharacterized protein. (445 aa)
	PV08_05943	Uncharacterized protein. (424 aa)
	PV08_04159	Uncharacterized protein. (422 aa)
	PV08_03507	Uncharacterized protein. (435 aa)
	PV08_00037	Uncharacterized protein. (400 aa)
	PV08_08702	Uncharacterized protein. (454 aa)
	PV08_06330	Uncharacterized protein. (449 aa)
	PV08_01959	Uncharacterized protein. (433 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00037	PV08_01007	A0A0D2BLM7	A0A0D2A6P2	Uncharacterized protein.	Uncharacterized protein.	0.762
PV08_00037	PV08_01273	A0A0D2BLM7	A0A0D1YZF7	Uncharacterized protein.	Uncharacterized protein.	0.689
PV08_00037	PV08_03507	A0A0D2BLM7	A0A0D2BJW6	Uncharacterized protein.	Uncharacterized protein.	0.683
PV08_00037	PV08_04412	A0A0D2BLM7	A0A0D1YPS5	Uncharacterized protein.	Uncharacterized protein.	0.756
PV08_00037	PV08_05302	A0A0D2BLM7	A0A0D1ZR13	Uncharacterized protein.	Uncharacterized protein.	0.772
PV08_00037	PV08_05821	A0A0D2BLM7	A0A0D1YL45	Uncharacterized protein.	Uncharacterized protein.	0.632
PV08_00037	PV08_06330	A0A0D2BLM7	A0A0D2BY87	Uncharacterized protein.	Uncharacterized protein.	0.471
PV08_00037	PV08_07543	A0A0D2BLM7	A0A0D2B746	Uncharacterized protein.	Uncharacterized protein.	0.671
PV08_00037	PV08_07717	A0A0D2BLM7	A0A0D2B8D9	Uncharacterized protein.	Uncharacterized protein.	0.655
PV08_00037	PV08_08234	A0A0D2BLM7	A0A0D1ZJS1	Uncharacterized protein.	Uncharacterized protein.	0.584
PV08_00037	PV08_08702	A0A0D2BLM7	A0A0D2BQV2	Uncharacterized protein.	Uncharacterized protein.	0.597
PV08_00037	PV08_09608	A0A0D2BLM7	A0A0D1YBL3	Uncharacterized protein.	Uncharacterized protein.	0.573
PV08_00037	PV08_09687	A0A0D2BLM7	A0A0D2B157	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.482
PV08_00037	PV08_10247	A0A0D2BLM7	A0A0D2AW43	Uncharacterized protein.	Uncharacterized protein.	0.588
PV08_01007	PV08_00037	A0A0D2A6P2	A0A0D2BLM7	Uncharacterized protein.	Uncharacterized protein.	0.762
PV08_01007	PV08_01273	A0A0D2A6P2	A0A0D1YZF7	Uncharacterized protein.	Uncharacterized protein.	0.786
PV08_01007	PV08_01319	A0A0D2A6P2	A0A0D1YZJ3	Uncharacterized protein.	Cytochrome b5 heme-binding domain-containing protein.	0.421
PV08_01007	PV08_01959	A0A0D2A6P2	A0A0D2CCZ6	Uncharacterized protein.	Uncharacterized protein.	0.422
PV08_01007	PV08_03507	A0A0D2A6P2	A0A0D2BJW6	Uncharacterized protein.	Uncharacterized protein.	0.718
PV08_01007	PV08_04159	A0A0D2A6P2	A0A0D2BDF6	Uncharacterized protein.	Uncharacterized protein.	0.441