(76 nodes) Nitrogen metabolism network (Exophiala spinifera)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_08234	Uncharacterized protein. (426 aa)
	PV08_10682	Uncharacterized protein. (413 aa)
	PV08_10236	BTB domain-containing protein. (251 aa)
	PV08_10066	Uncharacterized protein. (459 aa)
	PV08_01339	NMO domain-containing protein. (352 aa)
	PV08_00931	Zn(2)-C6 fungal-type domain-containing protein. (694 aa)
	PV08_00501	CN hydrolase domain-containing protein. (329 aa)
	PV08_00048	AAA domain-containing protein; Belongs to the AAA ATPase family. (408 aa)
	PV08_00028	Fungal_trans domain-containing protein. (724 aa)
	PV08_03475	CN hydrolase domain-containing protein. (332 aa)
	PV08_03245	NmrA domain-containing protein. (305 aa)
	PV08_02338	Glutamine amidotransferase type-2 domain-containing protein. (2150 aa)
	PV08_02313	Uncharacterized protein. (457 aa)
	PV08_06576	Uncharacterized protein. (516 aa)
	PV08_05821	Uncharacterized protein. (427 aa)
	PV08_05301	CN hydrolase domain-containing protein. (375 aa)
	PV08_05226	Helicase ATP-binding domain-containing protein. (509 aa)
	PV08_06997	Beta-lactamase domain-containing protein. (552 aa)
	PV08_08962	Zn(2)-C6 fungal-type domain-containing protein. (677 aa)
	PV08_07998	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (457 aa)
	PV08_09994	GMC_OxRdtase_N domain-containing protein. (447 aa)
	PV08_09033	Fungal_trans domain-containing protein. (576 aa)
	PV08_10958	Rieske domain-containing protein. (544 aa)
	PV08_10918	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (467 aa)
	PV08_11440	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (182 aa)
	PV08_09823	NMO domain-containing protein. (362 aa)
	PV08_02174	Zn(2)-C6 fungal-type domain-containing protein. (931 aa)
	PV08_00874	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (170 aa)
	PV08_00419	NMO domain-containing protein. (359 aa)
	PV08_03013	CN hydrolase domain-containing protein. (319 aa)
	PV08_04869	Uncharacterized protein. (369 aa)
	PV08_04064	Alpha-carbonic anhydrase domain-containing protein. (279 aa)
	PV08_06150	Uncharacterized protein. (176 aa)
	PV08_07629	Zn(2)-C6 fungal-type domain-containing protein. (764 aa)
	PV08_07418	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. (881 aa)
	cyn1	Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. (160 aa)
	PV08_01733	Fungal_trans domain-containing protein. (666 aa)
	PV08_08081	Beta-lactamase domain-containing protein. (149 aa)
	PV08_09992	Uncharacterized protein. (294 aa)
	PV08_09556	Uncharacterized protein. (700 aa)
	PV08_00209	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (465 aa)
	PV08_00168	NMO domain-containing protein. (360 aa)
	PV08_03584	Zn(2)-C6 fungal-type domain-containing protein. (1112 aa)
	PV08_03564	Zn(2)-C6 fungal-type domain-containing protein. (771 aa)
	PV08_03653	Zn(2)-C6 fungal-type domain-containing protein. (762 aa)
	PV08_10916	Beta-lactamase domain-containing protein. (580 aa)
	PV08_03425	Uncharacterized protein. (138 aa)
	PV08_10794	BTB domain-containing protein. (236 aa)
	PV08_10238	BTB domain-containing protein. (217 aa)
	PV08_02403	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (473 aa)
	PV08_11428	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (175 aa)
	PV08_04958	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (500 aa)
	PV08_04793	NMO domain-containing protein. (350 aa)
	PV08_11930	Uncharacterized protein. (534 aa)
	PV08_04545	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (490 aa)
	PV08_03743	Alpha-carbonic anhydrase domain-containing protein. (309 aa)
	PV08_06056	BTB domain-containing protein. (315 aa)
	PV08_05678	AAA domain-containing protein. (1056 aa)
	PV08_05386	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family. (978 aa)
	PV08_07675	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (1080 aa)
	PV08_07419	Nitrite reductase [NAD(P)H], large subunit. (1121 aa)
	PV08_07087	Uncharacterized protein. (849 aa)
	PV08_06921	Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family. (272 aa)
	PV08_08486	Beta-lactamase domain-containing protein. (607 aa)
	PV08_09993	GMC_oxred_C domain-containing protein. (249 aa)
	PV08_08080	Beta-lactamase domain-containing protein. (407 aa)
	PV08_09075	Dipeptidase; Belongs to the metallo-dependent hydrolases superfamily. Peptidase M19 family. (428 aa)
	PV08_11005	CN hydrolase domain-containing protein. (413 aa)
	PV08_10247	Uncharacterized protein. (426 aa)
	PV08_10237	BTB domain-containing protein. (230 aa)
	PV08_11462	Fungal_trans domain-containing protein. (636 aa)
	PV08_03800	Zn(2)-C6 fungal-type domain-containing protein. (839 aa)
	PV08_06464	Nitrate/nitrite transporter. (516 aa)
	PV08_05227	Uncharacterized protein. (425 aa)
	PV08_07466	Glutamine synthetase. (346 aa)
	PV08_07451	Uncharacterized protein. (1157 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00028	PV08_07418	A0A0D1YW10	A0A0D2BTR4	Fungal_trans domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.772
PV08_00168	PV08_07418	A0A0D2BLZ1	A0A0D2BTR4	NMO domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.736
PV08_00419	PV08_07418	A0A0D2C8G2	A0A0D2BTR4	NMO domain-containing protein.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.736
PV08_00501	PV08_02338	A0A0D1YXC5	A0A0D1YS55	CN hydrolase domain-containing protein.	Glutamine amidotransferase type-2 domain-containing protein.	0.740
PV08_00501	PV08_02403	A0A0D1YXC5	A0A0D2BHM5	CN hydrolase domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.690
PV08_00501	PV08_03013	A0A0D1YXC5	A0A0D2C550	CN hydrolase domain-containing protein.	CN hydrolase domain-containing protein.	0.598
PV08_00501	PV08_03475	A0A0D1YXC5	A0A0D1YV62	CN hydrolase domain-containing protein.	CN hydrolase domain-containing protein.	0.602
PV08_00501	PV08_04545	A0A0D1YXC5	A0A0D2BED1	CN hydrolase domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.690
PV08_00501	PV08_05301	A0A0D1YXC5	A0A0D1YJU9	CN hydrolase domain-containing protein.	CN hydrolase domain-containing protein.	0.730
PV08_00501	PV08_05386	A0A0D1YXC5	A0A0D2B9M3	CN hydrolase domain-containing protein.	Gln-synt_C domain-containing protein; Belongs to the glutamine synthetase family.	0.747
PV08_00501	PV08_07419	A0A0D1YXC5	A0A0D2B7I0	CN hydrolase domain-containing protein.	Nitrite reductase [NAD(P)H], large subunit.	0.822
PV08_00501	PV08_07466	A0A0D1YXC5	A0A0D1ZPE2	CN hydrolase domain-containing protein.	Glutamine synthetase.	0.747
PV08_00501	PV08_07675	A0A0D1YXC5	A0A0D2B889	CN hydrolase domain-containing protein.	NAD-specific glutamate dehydrogenase; NAD(+)-dependent glutamate dehydrogenase which degrades glutamate to ammonia and alpha-ketoglutarate. Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.778
PV08_00501	PV08_07998	A0A0D1YXC5	A0A0D1YCX1	CN hydrolase domain-containing protein.	Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.	0.778
PV08_00501	PV08_09992	A0A0D1YXC5	A0A0D2BNK5	CN hydrolase domain-containing protein.	Uncharacterized protein.	0.645
PV08_00501	PV08_09993	A0A0D1YXC5	A0A0D2B276	CN hydrolase domain-containing protein.	GMC_oxred_C domain-containing protein.	0.645
PV08_00501	PV08_09994	A0A0D1YXC5	A0A0D1YCQ0	CN hydrolase domain-containing protein.	GMC_OxRdtase_N domain-containing protein.	0.645
PV08_00501	PV08_10682	A0A0D1YXC5	A0A0D1ZEG9	CN hydrolase domain-containing protein.	Uncharacterized protein.	0.767
PV08_00501	PV08_10958	A0A0D1YXC5	A0A0D1Y9J2	CN hydrolase domain-containing protein.	Rieske domain-containing protein.	0.817
PV08_00501	PV08_11005	A0A0D1YXC5	A0A0D2AYB1	CN hydrolase domain-containing protein.	CN hydrolase domain-containing protein.	0.802