38 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_01934	Uncharacterized protein. (408 aa)
	PV08_05815	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1213 aa)
	PV08_09898	Uncharacterized protein. (238 aa)
	PV08_09544	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (560 aa)
	PV08_09062	RPOLD domain-containing protein. (334 aa)
	PV08_09080	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
	PV08_10985	Uncharacterized protein. (451 aa)
	PV08_10094	Uncharacterized protein. (329 aa)
	PV08_10292	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1561 aa)
	PV08_11607	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1739 aa)
	PV08_01636	Uncharacterized protein. (582 aa)
	PV08_01340	RNA_pol_L_2 domain-containing protein. (243 aa)
	PV08_00612	S1 domain-containing protein. (167 aa)
	PV08_03302	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1772 aa)
	PV08_04651	Uncharacterized protein. (187 aa)
	PV08_04549	Uncharacterized protein. (339 aa)
	PV08_10959	Uncharacterized protein. (441 aa)
	PV08_00265	DNA-directed RNA polymerase. (193 aa)
	PV08_03341	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1294 aa)
	PV08_04513	RNA_pol_L_2 domain-containing protein. (129 aa)
	PV08_04116	Uncharacterized protein. (327 aa)
	PV08_06742	Uncharacterized protein. (523 aa)
	PV08_02468	RBR-type E3 ubiquitin transferase. (723 aa)
	PV08_11001	DNA-directed RNA polymerase I, II, and III subunit RPABC5. (86 aa)
	PV08_00518	RPOL4c domain-containing protein. (152 aa)
	PV08_00613	Uncharacterized protein. (529 aa)
	PV08_01468	Diphthamide biosynthesis protein 3. (97 aa)
	PV08_01074	Uncharacterized protein. (478 aa)
	PV08_00126	Uncharacterized protein. (645 aa)
	PV08_02592	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1224 aa)
	PV08_01865	Transcription elongation factor S-II. (305 aa)
	PV08_01768	CBFD_NFYB_HMF domain-containing protein. (188 aa)
	PV08_01642	Uncharacterized protein. (318 aa)
	PV08_00705	Uncharacterized protein. (152 aa)
	PV08_00668	RPOLD domain-containing protein. (373 aa)
	PV08_08398	Uncharacterized protein. (74 aa)
	PV08_02441	Uncharacterized protein. (561 aa)
	PV08_05835	Uncharacterized protein. (858 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00265	PV08_00518	A0A0D1YWL0	A0A0D2BLX8	DNA-directed RNA polymerase.	RPOL4c domain-containing protein.	0.568
PV08_00265	PV08_00668	A0A0D1YWL0	A0A0D2BMD8	DNA-directed RNA polymerase.	RPOLD domain-containing protein.	0.996
PV08_00265	PV08_00705	A0A0D1YWL0	A0A0D2BNM3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_01074	A0A0D1YWL0	A0A0D2CAC6	DNA-directed RNA polymerase.	Uncharacterized protein.	0.611
PV08_00265	PV08_01340	A0A0D1YWL0	A0A0D2A7J8	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.483
PV08_00265	PV08_01636	A0A0D1YWL0	A0A0D2A8H0	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_01865	A0A0D1YWL0	A0A0D2BS72	DNA-directed RNA polymerase.	Transcription elongation factor S-II.	0.979
PV08_00265	PV08_01934	A0A0D1YWL0	A0A0D2CCX3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.996
PV08_00265	PV08_02592	A0A0D1YWL0	A0A0D2C3T5	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996
PV08_00265	PV08_03341	A0A0D1YWL0	A0A0D1YUW7	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.959
PV08_00265	PV08_04116	A0A0D1YWL0	A0A0D1YP46	DNA-directed RNA polymerase.	Uncharacterized protein.	0.978
PV08_00265	PV08_04513	A0A0D1YWL0	A0A0D1YQ14	DNA-directed RNA polymerase.	RNA_pol_L_2 domain-containing protein.	0.998
PV08_00265	PV08_04549	A0A0D1YWL0	A0A0D1ZXF0	DNA-directed RNA polymerase.	Uncharacterized protein.	0.971
PV08_00265	PV08_05815	A0A0D1YWL0	A0A0D2BAY4	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.955
PV08_00265	PV08_08398	A0A0D1YWL0	A0A0D1YDS8	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV08_00265	PV08_09062	A0A0D1YWL0	A0A0D2AZ98	DNA-directed RNA polymerase.	RPOLD domain-containing protein.	0.977
PV08_00265	PV08_09080	A0A0D1YWL0	A0A0D2AYL3	DNA-directed RNA polymerase.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.997
PV08_00265	PV08_09544	A0A0D1YWL0	A0A0D2AZV8	DNA-directed RNA polymerase.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.997
PV08_00265	PV08_09898	A0A0D1YWL0	A0A0D2B1Z3	DNA-directed RNA polymerase.	Uncharacterized protein.	0.997
PV08_00265	PV08_10292	A0A0D1YWL0	A0A0D2AW96	DNA-directed RNA polymerase.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.996