50 items (Exophiala spinifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	PV08_06394	Uncharacterized protein. (1027 aa)
	PV08_06206	Uncharacterized protein. (385 aa)
	PV08_06286	Zds_C domain-containing protein. (916 aa)
	PV08_04035	DNA_MISMATCH_REPAIR_2 domain-containing protein. (1006 aa)
	PV08_11884	Amino_oxidase domain-containing protein. (534 aa)
	PV08_04795	Uncharacterized protein. (510 aa)
	PV08_04905	DNA_MISMATCH_REPAIR_2 domain-containing protein. (990 aa)
	PV08_10769	Uncharacterized protein. (738 aa)
	PV08_00287	AAA domain-containing protein. (413 aa)
	PV08_00968	Uncharacterized protein. (147 aa)
	PV08_10007	Uncharacterized protein. (134 aa)
	PV08_02143	Uncharacterized protein. (581 aa)
	PV08_01684	AAA domain-containing protein. (1093 aa)
	PV08_06790	Replication factor C subunit 1. (1080 aa)
	PV08_07544	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (220 aa)
	PV08_05144	Uncharacterized protein. (661 aa)
	PV08_02547	AAA domain-containing protein. (407 aa)
	PV08_03568	DNA ligase. (881 aa)
	PV08_01969	CCHC-type domain-containing protein. (393 aa)
	PV08_02039	Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (174 aa)
	PV08_04399	Replication factor C subunit 4. (352 aa)
	PV08_09929	DNA_MISMATCH_REPAIR_2 domain-containing protein. (894 aa)
	PV08_07983	Uncharacterized protein. (151 aa)
	PV08_07325	DNA ligase. (866 aa)
	PV08_05911	Uncharacterized protein. (519 aa)
	PV08_03721	Uncharacterized protein. (265 aa)
	PV08_00250	DNA_mis_repair domain-containing protein. (940 aa)
	PV08_01600	DNA polymerase. (1107 aa)
	PV08_01665	Exonuclease domain-containing protein. (314 aa)
	PV08_11531	HET domain-containing protein. (686 aa)
	PV08_10647	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR). (926 aa)
	PV08_08054	Uncharacterized protein. (308 aa)
	PV08_06808	Replication factor C subunit 5. (354 aa)
	PV08_05327	Uncharacterized protein. (1032 aa)
	PV08_06173	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. (608 aa)
	PV08_04691	Uncharacterized protein. (1013 aa)
	PV08_04922	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1093 aa)
	PV08_05027	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1247 aa)
	PV08_05092	MutL_C domain-containing protein. (897 aa)
	PV08_01626	Uncharacterized protein. (111 aa)
	PV08_01972	Uncharacterized protein. (275 aa)
	PV08_11984	Uncharacterized protein; Involved in ubiquitin-mediated protein degradation. Regulatory factor in the ubiquitin/proteasome pathway that controls the turnover of proteasome substrates. Targets proteasomes to the nucleus and facilitates the degradation of nuclear proteins. (301 aa)
	PV08_09171	DNA_mis_repair domain-containing protein. (764 aa)
	PV08_09216	Uncharacterized protein. (226 aa)
	PV08_09450	Stn1 domain-containing protein. (344 aa)
	PV08_08985	HTH myb-type domain-containing protein. (556 aa)
	PV08_07239	Uncharacterized protein. (209 aa)
	PV08_07539	Vezatin domain-containing protein. (586 aa)
	PV08_05603	Uncharacterized protein. (165 aa)
	PV08_09008	CCHC-type domain-containing protein. (938 aa)

Your Current Organism:

Exophiala spinifera

NCBI taxonomy Id: 91928
Other names: ATCC 18218, CBS 899.68, DUKE 3342, E. spinifera, NCMH 152, NCPF 2358, Phialophora spinifera, Rhinocladiella spinifera

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
PV08_00250	PV08_01600	A0A0D1YWJ6	A0A0D1Z0D9	DNA_mis_repair domain-containing protein.	DNA polymerase.	0.585
PV08_00250	PV08_04035	A0A0D1YWJ6	A0A0D2BE23	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.965
PV08_00250	PV08_04691	A0A0D1YWJ6	A0A0D1ZY04	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.609
PV08_00250	PV08_04905	A0A0D1YWJ6	A0A0D2BGE0	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.943
PV08_00250	PV08_04922	A0A0D1YWJ6	A0A0D1ZYJ0	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.947
PV08_00250	PV08_05027	A0A0D1YWJ6	A0A0D1ZYT8	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.975
PV08_00250	PV08_05092	A0A0D1YWJ6	A0A0D1ZZ12	DNA_mis_repair domain-containing protein.	MutL_C domain-containing protein.	0.739
PV08_00250	PV08_05144	A0A0D1YWJ6	A0A0D2C2W4	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.927
PV08_00250	PV08_05327	A0A0D1YWJ6	A0A0D1ZR42	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.609
PV08_00250	PV08_06173	A0A0D1YWJ6	A0A0D1ZTL9	DNA_mis_repair domain-containing protein.	Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.	0.631
PV08_00250	PV08_06394	A0A0D1YWJ6	A0A0D2BBF7	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.803
PV08_00250	PV08_07539	A0A0D1YWJ6	A0A0D2B7U7	DNA_mis_repair domain-containing protein.	Vezatin domain-containing protein.	0.804
PV08_00250	PV08_07544	A0A0D1YWJ6	A0A0D2BU03	DNA_mis_repair domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.804
PV08_00250	PV08_09171	A0A0D1YWJ6	A0A0D2AYW2	DNA_mis_repair domain-containing protein.	DNA_mis_repair domain-containing protein.	0.989
PV08_00250	PV08_09929	A0A0D1YWJ6	A0A0D1YCJ8	DNA_mis_repair domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.945
PV08_00250	PV08_10647	A0A0D1YWJ6	A0A0D1ZEB6	DNA_mis_repair domain-containing protein.	DNA mismatch repair protein msh-2; Component of the post-replicative DNA mismatch repair system (MMR).	0.980
PV08_00250	PV08_10769	A0A0D1YWJ6	A0A0D2BJG9	DNA_mis_repair domain-containing protein.	Uncharacterized protein.	0.908
PV08_00287	PV08_01600	A0A0D2BL76	A0A0D1Z0D9	AAA domain-containing protein.	DNA polymerase.	0.924
PV08_00287	PV08_01665	A0A0D2BL76	A0A0D1Z0G8	AAA domain-containing protein.	Exonuclease domain-containing protein.	0.458
PV08_00287	PV08_01684	A0A0D2BL76	A0A0D2BRS7	AAA domain-containing protein.	AAA domain-containing protein.	0.988