11 items (Aptenodytes forsteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AS27_07771	Ras-related protein Ral-A. (206 aa)
	AS27_01247	RAS guanyl-releasing protein 1. (776 aa)
	AS27_01949	Ras-related protein Rap-1A. (158 aa)
	AS27_01987	Ras association domain-containing protein 5. (267 aa)
	AS27_09689	Ras-related protein Rap-1b. (184 aa)
	AS27_06786	Ras-related protein Ral-B. (168 aa)
	AS27_08116	Ral guanine nucleotide dissociation stimulator-like 1. (755 aa)
	AS27_03621	GTPase HRas. (189 aa)
	AS27_06253	GTPase KRas. (188 aa)
	AS27_08636	Ras guanyl-releasing protein 3. (699 aa)
	AS27_05800	RalA-binding protein 1. (657 aa)

Your Current Organism:

Aptenodytes forsteri

NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS27_01247	AS27_01949	A0A087QJS3	A0A087QPK0	RAS guanyl-releasing protein 1.	Ras-related protein Rap-1A.	0.901
AS27_01247	AS27_03621	A0A087QJS3	A0A087QVR0	RAS guanyl-releasing protein 1.	GTPase HRas.	0.846
AS27_01247	AS27_06253	A0A087QJS3	A0A087R1L3	RAS guanyl-releasing protein 1.	GTPase KRas.	0.899
AS27_01247	AS27_06786	A0A087QJS3	A0A087QTW5	RAS guanyl-releasing protein 1.	Ras-related protein Ral-B.	0.672
AS27_01247	AS27_07771	A0A087QJS3	A0A087QHP9	RAS guanyl-releasing protein 1.	Ras-related protein Ral-A.	0.672
AS27_01247	AS27_08636	A0A087QJS3	A0A087RAT2	RAS guanyl-releasing protein 1.	Ras guanyl-releasing protein 3.	0.834
AS27_01247	AS27_09689	A0A087QJS3	A0A087QQC0	RAS guanyl-releasing protein 1.	Ras-related protein Rap-1b.	0.901
AS27_01949	AS27_01247	A0A087QPK0	A0A087QJS3	Ras-related protein Rap-1A.	RAS guanyl-releasing protein 1.	0.901
AS27_01949	AS27_01987	A0A087QPK0	A0A087QPN5	Ras-related protein Rap-1A.	Ras association domain-containing protein 5.	0.740
AS27_01949	AS27_03621	A0A087QPK0	A0A087QVR0	Ras-related protein Rap-1A.	GTPase HRas.	0.563
AS27_01949	AS27_05800	A0A087QPK0	A0A087RBF2	Ras-related protein Rap-1A.	RalA-binding protein 1.	0.628
AS27_01949	AS27_06253	A0A087QPK0	A0A087R1L3	Ras-related protein Rap-1A.	GTPase KRas.	0.563
AS27_01949	AS27_06786	A0A087QPK0	A0A087QTW5	Ras-related protein Rap-1A.	Ras-related protein Ral-B.	0.566
AS27_01949	AS27_07771	A0A087QPK0	A0A087QHP9	Ras-related protein Rap-1A.	Ras-related protein Ral-A.	0.565
AS27_01949	AS27_08116	A0A087QPK0	A0A087QVF3	Ras-related protein Rap-1A.	Ral guanine nucleotide dissociation stimulator-like 1.	0.921
AS27_01949	AS27_08636	A0A087QPK0	A0A087RAT2	Ras-related protein Rap-1A.	Ras guanyl-releasing protein 3.	0.901
AS27_01949	AS27_09689	A0A087QPK0	A0A087QQC0	Ras-related protein Rap-1A.	Ras-related protein Rap-1b.	0.651
AS27_01987	AS27_01949	A0A087QPN5	A0A087QPK0	Ras association domain-containing protein 5.	Ras-related protein Rap-1A.	0.740
AS27_01987	AS27_03621	A0A087QPN5	A0A087QVR0	Ras association domain-containing protein 5.	GTPase HRas.	0.870
AS27_01987	AS27_06253	A0A087QPN5	A0A087R1L3	Ras association domain-containing protein 5.	GTPase KRas.	0.915