STRINGSTRING
AS27_07277 AS27_07277 AS27_15234 AS27_15234 AS27_03558 AS27_03558 AS27_11748 AS27_11748 AS27_13787 AS27_13787 AS27_10392 AS27_10392 AS27_10149 AS27_10149 EIF3E EIF3E AS27_15090 AS27_15090 AS27_15065 AS27_15065 AS27_02370 AS27_02370 AS27_06186 AS27_06186 AS27_13505 AS27_13505 AS27_13410 AS27_13410 AS27_08924 AS27_08924 AS27_15822 AS27_15822 AS27_08120 AS27_08120 AS27_07507 AS27_07507 AS27_09547 AS27_09547 AS27_01197 AS27_01197 AS27_15427 AS27_15427
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AS27_07277Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
AS27_15234Regulator of nonsense transcripts 2. (1268 aa)
AS27_03558Nuclear cap-binding protein subunit 1. (754 aa)
AS27_11748mRNA-decapping enzyme 1A. (541 aa)
AS27_13787M7GpppN-mRNA hydrolase. (407 aa)
AS27_10392Helicase with zinc finger domain 2. (2578 aa)
AS27_10149Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (63 aa)
EIF3EEukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation. (445 aa)
AS27_15090Poly(A)-specific ribonuclease PARN. (546 aa)
AS27_15065Serine/threonine-protein kinase SMG1; Belongs to the PI3/PI4-kinase family. (3643 aa)
AS27_02370Regulator of nonsense transcripts 1. (1057 aa)
AS27_06186mRNA-decapping enzyme 1B. (556 aa)
AS27_13505Protein SMG8. (835 aa)
AS27_13410Telomerase-binding protein EST1A. (1391 aa)
AS27_08924Proline-rich nuclear receptor coactivator 2. (140 aa)
AS27_15822Regulator of nonsense transcripts 3A. (409 aa)
AS27_08120Protein SMG7. (1140 aa)
AS27_07507Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (372 aa)
AS27_09547Eukaryotic peptide chain release factor subunit 1. (408 aa)
AS27_01197Poly(A)-specific ribonuclease PARN-like domain-containing protein 1. (500 aa)
AS27_15427Protein CASC3. (510 aa)
Your Current Organism:
Aptenodytes forsteri
NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin
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