44 items (Aptenodytes forsteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AS27_08519	Histone deacetylase complex subunit SAP18. (129 aa)
	AS27_08439	RNA-binding protein 25. (836 aa)
	AS27_07020	CUGBP Elav-like family member 3. (354 aa)
	AS27_07019	CUGBP Elav-like family member 4. (95 aa)
	AS27_08213	Ribonucleoprotein PTB-binding 2. (605 aa)
	AS27_13453	Nuclear speckle splicing regulatory protein 1. (544 aa)
	AS27_02261	CUGBP Elav-like family member 1. (515 aa)
	AS27_09308	RNA binding protein fox-1 3. (238 aa)
	AS27_02156	Fragile X mental retardation protein 1 B. (549 aa)
	AS27_07507	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (372 aa)
	AS27_09709	RNA-binding protein 5. (751 aa)
	AS27_03349	Poly(U)-binding-splicing factor PUF60. (522 aa)
	AS27_05166	Uncharacterized protein. (125 aa)
	AS27_03210	RNA-binding protein 38. (159 aa)
	AS27_15637	YTH domain-containing protein 1. (695 aa)
	AS27_08016	Putative RNA-binding protein 15. (579 aa)
	AS27_00455	RNA-binding protein Nova-1. (416 aa)
	AS27_07874	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (495 aa)
	AS27_07820	RNA binding protein fox-1 2. (301 aa)
	AS27_01238	Muscleblind-like 2. (337 aa)
	AS27_03163	RNA-binding protein 6. (1090 aa)
	AS27_03159	Putative RNA-binding protein 15B. (557 aa)
	AS27_08430	Muscleblind-like 1. (367 aa)
	AS27_07143	RNA binding protein fox-1 1. (390 aa)
	AS27_07311	CUGBP Elav-like family member 4. (123 aa)
	AS27_07310	CUGBP Elav-like family member 4. (361 aa)
	AS27_04231	RNA-binding protein 7. (255 aa)
	AS27_01193	Pre-mRNA-splicing regulator WTAP. (371 aa)
	AS27_14485	Myogenic factor. (296 aa)
	AS27_10272	Protein FAM172A. (416 aa)
	AS27_14113	Fragile X mental retardation syndrome-related protein 1. (643 aa)
	AS27_03002	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (592 aa)
	AS27_07257	Muscleblind-like 3. (371 aa)
	AS27_08330	Serine/arginine repetitive matrix protein 4. (567 aa)
	AS27_15227	CUGBP Elav-like family member 2. (494 aa)
	AS27_03563	WD40 repeat-containing protein SMU1. (505 aa)
	AS27_13655	Transformer-2 protein beta. (251 aa)
	AS27_13888	KH domain-containing, RNA-binding, signal transduction-associated protein 1. (329 aa)
	AS27_13848	Thyroid hormone receptor-associated protein 3. (976 aa)
	AS27_12799	RE1-silencing transcription factor. (888 aa)
	AS27_12152	Zinc finger CCCH domain-containing protein 10. (358 aa)
	AS27_02458	CUGBP Elav-like family member 5. (400 aa)
	AS27_00712	KH domain-containing, RNA-binding, signal transduction-associated protein 2. (275 aa)
	AS27_06404	Serine/arginine-rich splicing factor 2. (199 aa)

Your Current Organism:

Aptenodytes forsteri

NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS27_00712	AS27_13453	A0A087R2Z3	A0A087QZX4	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	Nuclear speckle splicing regulatory protein 1.	0.400
AS27_00712	AS27_13888	A0A087R2Z3	A0A087RCR8	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	KH domain-containing, RNA-binding, signal transduction-associated protein 1.	0.622
AS27_01193	AS27_03159	A0A087QH08	A0A087QIW4	Pre-mRNA-splicing regulator WTAP.	Putative RNA-binding protein 15B.	0.629
AS27_01193	AS27_08016	A0A087QH08	A0A087QMX7	Pre-mRNA-splicing regulator WTAP.	Putative RNA-binding protein 15.	0.629
AS27_01193	AS27_15637	A0A087QH08	A0A087QR69	Pre-mRNA-splicing regulator WTAP.	YTH domain-containing protein 1.	0.611
AS27_01238	AS27_02261	A0A087QKA4	A0A087QYK1	Muscleblind-like 2.	CUGBP Elav-like family member 1.	0.509
AS27_01238	AS27_15227	A0A087QKA4	A0A087RE33	Muscleblind-like 2.	CUGBP Elav-like family member 2.	0.508
AS27_02156	AS27_03002	A0A087QUI1	A0A087RIA9	Fragile X mental retardation protein 1 B.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.402
AS27_02156	AS27_07507	A0A087QUI1	A0A087QTI0	Fragile X mental retardation protein 1 B.	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.	0.433
AS27_02156	AS27_14113	A0A087QUI1	A0A087RJ11	Fragile X mental retardation protein 1 B.	Fragile X mental retardation syndrome-related protein 1.	0.952
AS27_02261	AS27_01238	A0A087QYK1	A0A087QKA4	CUGBP Elav-like family member 1.	Muscleblind-like 2.	0.509
AS27_02261	AS27_07257	A0A087QYK1	A0A087RI39	CUGBP Elav-like family member 1.	Muscleblind-like 3.	0.508
AS27_02261	AS27_07820	A0A087QYK1	A0A087QLK9	CUGBP Elav-like family member 1.	RNA binding protein fox-1 2.	0.415
AS27_02261	AS27_08430	A0A087QYK1	A0A087QIL2	CUGBP Elav-like family member 1.	Muscleblind-like 1.	0.656
AS27_03002	AS27_02156	A0A087RIA9	A0A087QUI1	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Fragile X mental retardation protein 1 B.	0.402
AS27_03002	AS27_03163	A0A087RIA9	A0A087QIW7	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	RNA-binding protein 6.	0.642
AS27_03002	AS27_03349	A0A087RIA9	A0A087QTA8	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Poly(U)-binding-splicing factor PUF60.	0.435
AS27_03002	AS27_03563	A0A087RIA9	A0A087RD91	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	WD40 repeat-containing protein SMU1.	0.640
AS27_03002	AS27_04231	A0A087RIA9	A0A087QHG5	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	RNA-binding protein 7.	0.657
AS27_03002	AS27_06404	A0A087RIA9	A0A087R2H0	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Serine/arginine-rich splicing factor 2.	0.558