25 items (Aptenodytes forsteri) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AS27_06063	Catenin alpha-2. (162 aa)
	AS27_06296	Proline-rich protein 5. (404 aa)
	AS27_03374	Target of rapamycin complex 2 subunit MAPKAP1. (522 aa)
	AS27_04659	RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (465 aa)
	AS27_14848	Syntaxin-7; Belongs to the syntaxin family. (230 aa)
	AS27_13965	Cadherin-5; Cadherins are calcium-dependent cell adhesion proteins. (764 aa)
	AS27_03992	Guanine nucleotide exchange factor VAV3. (764 aa)
	AS27_13664	Non-specific serine/threonine protein kinase. (521 aa)
	AS27_01110	Rapamycin-insensitive companion of mTOR. (1682 aa)
	AS27_05971	Non-specific serine/threonine protein kinase. (544 aa)
	AS27_12362	Target of rapamycin complex subunit lst8. (214 aa)
	AS27_12398	3-phosphoinositide-dependent protein kinase 1. (514 aa)
	AS27_10091	Syntaxin-12; Belongs to the syntaxin family. (230 aa)
	AS27_03513	Caveolin; May act as a scaffolding protein within caveolar membranes. Interacts directly with G-protein alpha subunits and can functionally regulate their activity; Belongs to the caveolin family. (116 aa)
	AS27_14416	Armadillo repeat protein deleted in velo-cardio-facial syndrome. (939 aa)
	AS27_09544	Catenin alpha-1. (905 aa)
	AS27_13384	Catenin delta-1. (932 aa)
	AS27_09442	Catenin alpha-3. (194 aa)
	AS27_09439	Catenin alpha-3. (698 aa)
	AS27_01660	Guanine nucleotide exchange factor VAV2. (772 aa)
	AS27_10434	Catenin beta-1. (673 aa)
	AS27_00218	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily. (464 aa)
	AS27_00435	Non-specific serine/threonine protein kinase. (540 aa)
	AS27_11212	Junction plakoglobin. (753 aa)
	AS27_12991	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2517 aa)

Your Current Organism:

Aptenodytes forsteri

NCBI taxonomy Id: 9233
Other names: A. forsteri, emperor penguin

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS27_00218	AS27_00435	A0A087QHZ5	A0A087QI32	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.482
AS27_00218	AS27_01110	A0A087QHZ5	A0A087RDG6	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Rapamycin-insensitive companion of mTOR.	0.879
AS27_00218	AS27_01660	A0A087QHZ5	A0A087RH34	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Guanine nucleotide exchange factor VAV2.	0.415
AS27_00218	AS27_03374	A0A087QHZ5	A0A087R3M3	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Target of rapamycin complex 2 subunit MAPKAP1.	0.788
AS27_00218	AS27_03992	A0A087QHZ5	A0A087R9K7	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Guanine nucleotide exchange factor VAV3.	0.415
AS27_00218	AS27_04659	A0A087QHZ5	A0A087R5C2	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.832
AS27_00218	AS27_05971	A0A087QHZ5	A0A087RFB7	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.482
AS27_00218	AS27_10434	A0A087QHZ5	A0A087QH36	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Catenin beta-1.	0.695
AS27_00218	AS27_11212	A0A087QHZ5	A0A087QJ69	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Junction plakoglobin.	0.654
AS27_00218	AS27_12362	A0A087QHZ5	A0A087RG77	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Target of rapamycin complex subunit lst8.	0.666
AS27_00218	AS27_12398	A0A087QHZ5	A0A087RGB3	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	3-phosphoinositide-dependent protein kinase 1.	0.965
AS27_00218	AS27_12991	A0A087QHZ5	A0A087QL41	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.947
AS27_00218	AS27_13664	A0A087QHZ5	A0A087RD53	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	Non-specific serine/threonine protein kinase.	0.460
AS27_00435	AS27_00218	A0A087QI32	A0A087QHZ5	Non-specific serine/threonine protein kinase.	RAC-gamma serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.482
AS27_00435	AS27_01660	A0A087QI32	A0A087RH34	Non-specific serine/threonine protein kinase.	Guanine nucleotide exchange factor VAV2.	0.543
AS27_00435	AS27_03992	A0A087QI32	A0A087R9K7	Non-specific serine/threonine protein kinase.	Guanine nucleotide exchange factor VAV3.	0.543
AS27_00435	AS27_04659	A0A087QI32	A0A087R5C2	Non-specific serine/threonine protein kinase.	RAC-alpha serine/threonine-protein kinase; Belongs to the protein kinase superfamily.	0.482
AS27_00435	AS27_06063	A0A087QI32	A0A087QN50	Non-specific serine/threonine protein kinase.	Catenin alpha-2.	0.451
AS27_00435	AS27_09439	A0A087QI32	A0A087QMR5	Non-specific serine/threonine protein kinase.	Catenin alpha-3.	0.451
AS27_00435	AS27_09442	A0A087QI32	A0A087QMR7	Non-specific serine/threonine protein kinase.	Catenin alpha-3.	0.451