STRINGSTRING
AS28_12562 AS28_12562 AS28_12578 AS28_12578 H3F3A H3F3A KDM6A KDM6A AS28_12566 AS28_12566 AS28_12561 AS28_12561 AS28_12568 AS28_12568 AS28_08188 AS28_08188 AS28_09596 AS28_09596 H3F3B H3F3B CMC4 CMC4 AS28_14622 AS28_14622 AS28_08341 AS28_08341 AS28_12563 AS28_12563 AS28_12570 AS28_12570 MYSM1 MYSM1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AS28_12562Histone H2B; Belongs to the histone H2B family. (126 aa)
AS28_12578Histone H2A; Belongs to the histone H2A family. (89 aa)
H3F3AHistone H3.3. (94 aa)
KDM6ALysine-specific demethylase 6A. (1315 aa)
AS28_12566Histone H2B; Belongs to the histone H2B family. (126 aa)
AS28_12561Histone H3; Belongs to the histone H3 family. (133 aa)
AS28_12568Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
AS28_08188Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
AS28_09596Core histone macro-H2A; Variant histone H2A which replaces conventional H2A in a subset of nucleosomes. (372 aa)
H3F3BHistone H3; Belongs to the histone H3 family. (136 aa)
CMC4Cx9C motif-containing protein 4. (48 aa)
AS28_14622Histone H2A; Belongs to the histone H2A family. (104 aa)
AS28_08341Histone H2B; Belongs to the histone H2B family. (98 aa)
AS28_12563Histone H2B; Belongs to the histone H2B family. (126 aa)
AS28_12570Histone H3. (96 aa)
MYSM1Histone H2A deubiquitinase MYSM1. (797 aa)
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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