60 items (Pygoscelis adeliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AS28_07554	Vitamin D3 hydroxylase-associated protein. (557 aa)
	DECR1	Uncharacterized protein. (313 aa)
	AUH	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (252 aa)
	ACOX1	Peroxisomal acyl-coenzyme A oxidase 1. (625 aa)
	PPARD	Peroxisome proliferator-activated receptor delta. (443 aa)
	HADHB	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (454 aa)
	AS28_07555	Fatty-acid amide hydrolase 1. (573 aa)
	ABHD3	Abhydrolase domain-containing protein 3. (357 aa)
	FAAH2	Fatty-acid amide hydrolase 2. (468 aa)
	HADHA	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (670 aa)
	AS28_07323	ETF domain-containing protein. (309 aa)
	SLC25A17	Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family. (289 aa)
	ADIPOQ	Adiponectin. (243 aa)
	PEX2	Peroxisome biogenesis factor 2. (302 aa)
	HSD17B4	Peroxisomal multifunctional enzyme type 2. (718 aa)
	PEX7	Peroxisomal targeting signal 2 receptor. (273 aa)
	AS28_01675	Hydroxyacid oxidase 1. (335 aa)
	SCP2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (521 aa)
	NUDT19	Uncharacterized protein. (146 aa)
	AS28_09870	Uncharacterized protein. (367 aa)
	NUDT7	Peroxisomal coenzyme A diphosphatase NUDT7. (180 aa)
	AS28_08269	Uncharacterized protein. (389 aa)
	ACADL	Uncharacterized protein. (406 aa)
	AS28_04726	Phytanoyl-CoA dioxygenase, peroxisomal. (307 aa)
	SLC27A4	Long-chain fatty acid transport protein 4. (635 aa)
	ETFDH	Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (608 aa)
	ACAT1	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (406 aa)
	DECR2	Peroxisomal 2,4-dienoyl-CoA reductase. (228 aa)
	ACOT8	Acyl-coenzyme A thioesterase 8. (231 aa)
	ABCD3	ATP-binding cassette sub-family D member 3. (621 aa)
	PODN	Podocan. (503 aa)
	ACAD10	Acyl-CoA dehydrogenase family member 10. (579 aa)
	PCCB	Uncharacterized protein. (477 aa)
	ECI1	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (247 aa)
	PEX13	Peroxisomal membrane protein PEX13. (361 aa)
	ACOX2	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (658 aa)
	ECI2	ACB domain-containing protein. (379 aa)
	HACL1	2-hydroxyacyl-CoA lyase 1; Belongs to the TPP enzyme family. (508 aa)
	CPT2	Carn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (605 aa)
	ACAA2	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family. (397 aa)
	BDH2	3-hydroxybutyrate dehydrogenase type 2. (221 aa)
	ABCD2	ATP-binding cassette sub-family D member 2. (679 aa)
	HADH	Uncharacterized protein. (271 aa)
	ACADS	Uncharacterized protein. (397 aa)
	PCK1	Phosphoenolpyruvate carboxykinase, cytosolic [GTP]. (622 aa)
	SESN2	Sestrin-2. (133 aa)
	AS28_06576	Putative acyl-CoA dehydrogenase 6. (326 aa)
	AS28_07553	Fatty-acid amide hydrolase 1. (547 aa)
	ADTRP	Androgen-dependent TFPI-regulating protein. (219 aa)
	CPT1A	Carnitine O-palmitoyltransferase 1, liver isoform; Belongs to the carnitine/choline acetyltransferase family. (770 aa)
	AIG1	Androgen-induced 1. (179 aa)
	ABCD4	ATP-binding cassette sub-family D member 4. (591 aa)
	ABHD2	Abhydrolase domain-containing protein 2. (426 aa)
	ECHDC2	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (222 aa)
	ACAT2	Acetyl-CoA acetyltransferase, cytosolic; Belongs to the thiolase-like superfamily. Thiolase family. (334 aa)
	LPIN2	Phosphatidate phosphatase LPIN2. (887 aa)
	EHHADH	Peroxisomal bifunctional enzyme; Belongs to the enoyl-CoA hydratase/isomerase family. (164 aa)
	ACOX3	Peroxisomal acyl-coenzyme A oxidase 3. (683 aa)
	AS28_14718	3-ketoacyl-CoA thiolase A, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family. (367 aa)
	CRAT	Carnitine O-acetyltransferase; Belongs to the carnitine/choline acetyltransferase family. (616 aa)

Your Current Organism:

Pygoscelis adeliae

NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ABCD2	ABCD3	A0A093P515	A0A093NPV5	ATP-binding cassette sub-family D member 2.	ATP-binding cassette sub-family D member 3.	0.981
ABCD2	ABCD4	A0A093P515	A0A093NG72	ATP-binding cassette sub-family D member 2.	ATP-binding cassette sub-family D member 4.	0.963
ABCD2	AS28_14718	A0A093P515	A0A093RSA2	ATP-binding cassette sub-family D member 2.	3-ketoacyl-CoA thiolase A, peroxisomal; Belongs to the thiolase-like superfamily. Thiolase family.	0.522
ABCD2	ECI2	A0A093P515	A0A093NVJ8	ATP-binding cassette sub-family D member 2.	ACB domain-containing protein.	0.722
ABCD2	HSD17B4	A0A093P515	A0A093QX97	ATP-binding cassette sub-family D member 2.	Peroxisomal multifunctional enzyme type 2.	0.495
ABCD2	PEX13	A0A093P515	A0A093NV58	ATP-binding cassette sub-family D member 2.	Peroxisomal membrane protein PEX13.	0.800
ABCD2	PEX2	A0A093P515	A0A093QWA4	ATP-binding cassette sub-family D member 2.	Peroxisome biogenesis factor 2.	0.691
ABCD2	PEX7	A0A093P515	A0A093QY82	ATP-binding cassette sub-family D member 2.	Peroxisomal targeting signal 2 receptor.	0.495
ABCD2	SCP2	A0A093P515	A0A093R093	ATP-binding cassette sub-family D member 2.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.758
ABCD2	SLC25A17	A0A093P515	A0A093QQY0	ATP-binding cassette sub-family D member 2.	Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.715
ABCD3	ABCD2	A0A093NPV5	A0A093P515	ATP-binding cassette sub-family D member 3.	ATP-binding cassette sub-family D member 2.	0.981
ABCD3	ABCD4	A0A093NPV5	A0A093NG72	ATP-binding cassette sub-family D member 3.	ATP-binding cassette sub-family D member 4.	0.900
ABCD3	ACOX1	A0A093NPV5	A0A093P5F7	ATP-binding cassette sub-family D member 3.	Peroxisomal acyl-coenzyme A oxidase 1.	0.458
ABCD3	ECI2	A0A093NPV5	A0A093NVJ8	ATP-binding cassette sub-family D member 3.	ACB domain-containing protein.	0.523
ABCD3	HSD17B4	A0A093NPV5	A0A093QX97	ATP-binding cassette sub-family D member 3.	Peroxisomal multifunctional enzyme type 2.	0.430
ABCD3	PEX13	A0A093NPV5	A0A093NV58	ATP-binding cassette sub-family D member 3.	Peroxisomal membrane protein PEX13.	0.788
ABCD3	PEX2	A0A093NPV5	A0A093QWA4	ATP-binding cassette sub-family D member 3.	Peroxisome biogenesis factor 2.	0.714
ABCD3	SCP2	A0A093NPV5	A0A093R093	ATP-binding cassette sub-family D member 3.	Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.	0.657
ABCD3	SLC25A17	A0A093NPV5	A0A093QQY0	ATP-binding cassette sub-family D member 3.	Peroxisomal membrane protein PMP34; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.697
ABCD4	ABCD2	A0A093NG72	A0A093P515	ATP-binding cassette sub-family D member 4.	ATP-binding cassette sub-family D member 2.	0.963