STRINGSTRING
LIMD1 LIMD1 PSMA7 PSMA7 HIF1A HIF1A UBB UBB PSMA1 PSMA1 AS28_07061 AS28_07061 AS28_04036 AS28_04036 WTIP WTIP UBE2D1 UBE2D1 PSMD10 PSMD10 EGLN3 EGLN3 TCEB2 TCEB2 RPS27A RPS27A EPAS1 EPAS1 RBX1 RBX1 AS28_13627 AS28_13627 PSMD1 PSMD1 TCEB1 TCEB1 VHL VHL EGLN1 EGLN1 UBE2D3 UBE2D3
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LIMD1LIM domain-containing protein 1. (258 aa)
PSMA7Proteasome endopeptidase complex. (216 aa)
HIF1AHypoxia-inducible factor 1-alpha. (377 aa)
UBBPolyubiquitin. (290 aa)
PSMA1Proteasome endopeptidase complex. (246 aa)
AS28_07061Ubiquitin-conjugating enzyme E2 D2; Belongs to the ubiquitin-conjugating enzyme family. (125 aa)
AS28_04036Hypoxia-inducible factor 1-alpha. (59 aa)
WTIPWilms tumor protein 1-interacting protein. (212 aa)
UBE2D1Ubiquitin-conjugating enzyme E2 D1; Belongs to the ubiquitin-conjugating enzyme family. (126 aa)
PSMD1026S proteasome non-ATPase regulatory subunit 10. (155 aa)
EGLN3Egl nine 3. (79 aa)
TCEB2Transcription elongation factor B polypeptide 2. (120 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (141 aa)
EPAS1Endothelial PAS domain-containing protein 1. (860 aa)
RBX1RING-box protein 1. (78 aa)
AS28_1362726S protease regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
PSMD126S proteasome non-ATPase regulatory subunit 1. (951 aa)
TCEB1Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family. (112 aa)
VHLVon Hippel-Lindau disease tumor suppressor. (117 aa)
EGLN1Egl nine 1. (78 aa)
UBE2D3Ubiquitin-conjugating enzyme E2 D3; Belongs to the ubiquitin-conjugating enzyme family. (118 aa)
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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