STRINGSTRING
RIPK2 RIPK2 AS28_11597 AS28_11597 AS28_12920 AS28_12920 UBB UBB MYD88 MYD88 TRAF6 TRAF6 NGF NGF SQSTM1 SQSTM1 GSAP GSAP IKBKB IKBKB NFKB1 NFKB1 NGFR NGFR RPS27A RPS27A PRKCI PRKCI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
RIPK2Receptor-interacting serine/threonine-protein kinase 2. (512 aa)
AS28_11597Tumor necrosis factor receptor superfamily member 16. (92 aa)
AS28_12920Receptor-interacting serine/threonine-protein kinase 2. (201 aa)
UBBPolyubiquitin. (290 aa)
MYD88Myeloid differentiation primary response protein MyD88. (186 aa)
TRAF6TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (545 aa)
NGFBeta-nerve growth factor; Belongs to the NGF-beta family. (241 aa)
SQSTM1Sequestosome-1. (398 aa)
GSAPGamma-secretase-activating protein. (820 aa)
IKBKBInhibitor of nuclear factor kappa-B kinase subunit beta. (693 aa)
NFKB1Nuclear factor NF-kappa-B p105 subunit. (952 aa)
NGFRTumor necrosis factor receptor superfamily member 16. (173 aa)
RPS27AUbiquitin-40S ribosomal protein S27a. (141 aa)
PRKCIProtein kinase C iota type; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (562 aa)
Your Current Organism:
Pygoscelis adeliae
NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia
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