10 items (Pygoscelis adeliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	GSAP	Gamma-secretase-activating protein. (820 aa)
	AS28_11597	Tumor necrosis factor receptor superfamily member 16. (92 aa)
	UBB	Polyubiquitin. (290 aa)
	TRAF6	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family. (545 aa)
	NGF	Beta-nerve growth factor; Belongs to the NGF-beta family. (241 aa)
	SQSTM1	Sequestosome-1. (398 aa)
	IKBKB	Inhibitor of nuclear factor kappa-B kinase subunit beta. (693 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit. (952 aa)
	NGFR	Tumor necrosis factor receptor superfamily member 16. (173 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (141 aa)

Your Current Organism:

Pygoscelis adeliae

NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS28_11597	GSAP	A0A093R3X1	A0A093P1B2	Tumor necrosis factor receptor superfamily member 16.	Gamma-secretase-activating protein.	0.417
AS28_11597	IKBKB	A0A093R3X1	A0A093P138	Tumor necrosis factor receptor superfamily member 16.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.419
AS28_11597	NGFR	A0A093R3X1	A0A093NUT5	Tumor necrosis factor receptor superfamily member 16.	Tumor necrosis factor receptor superfamily member 16.	0.900
AS28_11597	SQSTM1	A0A093R3X1	A0A093P1L6	Tumor necrosis factor receptor superfamily member 16.	Sequestosome-1.	0.476
AS28_11597	TRAF6	A0A093R3X1	A0A093PA44	Tumor necrosis factor receptor superfamily member 16.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.694
GSAP	AS28_11597	A0A093P1B2	A0A093R3X1	Gamma-secretase-activating protein.	Tumor necrosis factor receptor superfamily member 16.	0.417
GSAP	IKBKB	A0A093P1B2	A0A093P138	Gamma-secretase-activating protein.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.501
GSAP	NGFR	A0A093P1B2	A0A093NUT5	Gamma-secretase-activating protein.	Tumor necrosis factor receptor superfamily member 16.	0.417
GSAP	RPS27A	A0A093P1B2	A0A093NGN6	Gamma-secretase-activating protein.	Ubiquitin-40S ribosomal protein S27a.	0.779
GSAP	TRAF6	A0A093P1B2	A0A093PA44	Gamma-secretase-activating protein.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.893
GSAP	UBB	A0A093P1B2	A0A093PDK8	Gamma-secretase-activating protein.	Polyubiquitin.	0.837
IKBKB	AS28_11597	A0A093P138	A0A093R3X1	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Tumor necrosis factor receptor superfamily member 16.	0.419
IKBKB	GSAP	A0A093P138	A0A093P1B2	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Gamma-secretase-activating protein.	0.501
IKBKB	NFKB1	A0A093P138	A0A093NWU7	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Nuclear factor NF-kappa-B p105 subunit.	0.974
IKBKB	NGFR	A0A093P138	A0A093NUT5	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Tumor necrosis factor receptor superfamily member 16.	0.419
IKBKB	RPS27A	A0A093P138	A0A093NGN6	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Ubiquitin-40S ribosomal protein S27a.	0.554
IKBKB	SQSTM1	A0A093P138	A0A093P1L6	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Sequestosome-1.	0.618
IKBKB	TRAF6	A0A093P138	A0A093PA44	Inhibitor of nuclear factor kappa-B kinase subunit beta.	TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.	0.856
IKBKB	UBB	A0A093P138	A0A093PDK8	Inhibitor of nuclear factor kappa-B kinase subunit beta.	Polyubiquitin.	0.563
NFKB1	IKBKB	A0A093NWU7	A0A093P138	Nuclear factor NF-kappa-B p105 subunit.	Inhibitor of nuclear factor kappa-B kinase subunit beta.	0.974