54 items (Pygoscelis adeliae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AS28_13627	26S protease regulatory subunit 4; Belongs to the AAA ATPase family. (438 aa)
	PSMA1	Proteasome endopeptidase complex. (246 aa)
	AS28_11623	Protein kinase C beta type; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. (578 aa)
	AS28_08482	Ig lambda chain V-1 region. (105 aa)
	RASGRP3	Ras guanyl-releasing protein 3. (699 aa)
	SOS1	Son of sevenless 1. (1298 aa)
	ORAI2	Protein orai-2. (257 aa)
	CD2AP	CD2-associated protein. (642 aa)
	RASGRP1	RAS guanyl-releasing protein 1. (776 aa)
	MALT1	Mucosa-associated lymphoid tissue lymphoma translocation protein 1. (192 aa)
	HRAS	GTPase HRas. (189 aa)
	WDR92	WD repeat-containing protein 92. (297 aa)
	DAPP1	Dual adapter for phosphotyrosine and 3-phosphotyrosine and 3-phosphoinositide. (240 aa)
	AS28_07259	Ig heavy chain V-III region DOB. (81 aa)
	SH3KBP1	SH3 domain-containing kinase-binding protein 1. (648 aa)
	NRAS	GTPase NRas. (154 aa)
	TRPC1	Short transient receptor potential channel 1. (736 aa)
	IGLL1	Ig lambda chain V-1 region. (95 aa)
	AS28_04633	Inositol 1,4,5-trisphosphate receptor type 2. (2701 aa)
	AS28_11622	Protein kinase C beta type. (43 aa)
	AS28_08483	Ig lambda chain V-1 region. (93 aa)
	AS28_09491	Tyrosine-protein kinase. (614 aa)
	PIK3CD	Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform; Belongs to the PI3/PI4-kinase family. (1053 aa)
	PSMD10	26S proteasome non-ATPase regulatory subunit 10. (155 aa)
	KRAS	GTPase KRas. (188 aa)
	PSMA7	Proteasome endopeptidase complex. (216 aa)
	AS28_14626	B-cell scaffold protein with ankyrin repeats. (381 aa)
	NFATC3	Nuclear factor of activated T-cells, cytoplasmic 3. (1057 aa)
	NFKB1	Nuclear factor NF-kappa-B p105 subunit. (952 aa)
	AS28_07258	Ig heavy chain V-II region WAH. (88 aa)
	CARD11	Caspase recruitment domain-containing protein 11. (1165 aa)
	STIM1	Stromal interaction molecule 1. (406 aa)
	AS28_08841	Mucosa-associated lymphoid tissue lymphoma translocation protein 1. (221 aa)
	CD79B	B-cell antigen receptor complex-associated protein beta chain. (227 aa)
	BLNK	B-cell linker protein. (555 aa)
	BTRC	F-box/WD repeat-containing protein 1A. (593 aa)
	GRB2	Growth factor receptor-bound protein 2. (217 aa)
	BCL10	B-cell lymphoma/leukemia 10. (218 aa)
	PSMD1	26S proteasome non-ATPase regulatory subunit 1. (951 aa)
	PIK3AP1	Phosphoinositide 3-kinase adapter protein 1. (797 aa)
	CUL1	Cullin-1; Belongs to the cullin family. (791 aa)
	SKP1	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	STIM2	Stromal interaction molecule 2. (673 aa)
	ORAI1	Calcium release-activated calcium channel protein 1. (163 aa)
	AS28_09824	Ig heavy chain V region 1B43. (103 aa)
	PTPN6	Tyrosine-protein phosphatase non-receptor type 6. (608 aa)
	BLK	Tyrosine-protein kinase. (443 aa)
	FKBP1B	Peptidylprolyl isomerase. (80 aa)
	RPS27A	Ubiquitin-40S ribosomal protein S27a. (141 aa)
	AS28_04692	Uncharacterized protein. (81 aa)
	FKBP1A	Peptidylprolyl isomerase. (80 aa)
	FBXW11	F-box/WD repeat-containing protein 11. (552 aa)
	VPREB3	Pre-B lymphocyte protein 3. (124 aa)
	UBB	Polyubiquitin. (290 aa)

Your Current Organism:

Pygoscelis adeliae

NCBI taxonomy Id: 9238
Other names: Adelie penguin, P. adeliae, Pygoscelis adelia

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AS28_04633	ORAI1	A0A093P5H9	A0A093NM22	Inositol 1,4,5-trisphosphate receptor type 2.	Calcium release-activated calcium channel protein 1.	0.477
AS28_04633	ORAI2	A0A093P5H9	A0A093QYJ3	Inositol 1,4,5-trisphosphate receptor type 2.	Protein orai-2.	0.477
AS28_04633	STIM1	A0A093P5H9	A0A093NSV2	Inositol 1,4,5-trisphosphate receptor type 2.	Stromal interaction molecule 1.	0.738
AS28_04633	STIM2	A0A093P5H9	A0A093NMC6	Inositol 1,4,5-trisphosphate receptor type 2.	Stromal interaction molecule 2.	0.737
AS28_04633	TRPC1	A0A093P5H9	A0A093P6H2	Inositol 1,4,5-trisphosphate receptor type 2.	Short transient receptor potential channel 1.	0.474
AS28_04692	AS28_08482	A0A093NBC1	A0A093PI65	Uncharacterized protein.	Ig lambda chain V-1 region.	0.515
AS28_04692	AS28_08483	A0A093NBC1	A0A093P4F7	Uncharacterized protein.	Ig lambda chain V-1 region.	0.515
AS28_04692	IGLL1	A0A093NBC1	A0A093P651	Uncharacterized protein.	Ig lambda chain V-1 region.	0.515
AS28_04692	VPREB3	A0A093NBC1	A0A093PCD4	Uncharacterized protein.	Pre-B lymphocyte protein 3.	0.515
AS28_07258	AS28_08482	A0A093NWL1	A0A093PI65	Ig heavy chain V-II region WAH.	Ig lambda chain V-1 region.	0.596
AS28_07258	AS28_08483	A0A093NWL1	A0A093P4F7	Ig heavy chain V-II region WAH.	Ig lambda chain V-1 region.	0.596
AS28_07258	CD79B	A0A093NWL1	A0A093NS07	Ig heavy chain V-II region WAH.	B-cell antigen receptor complex-associated protein beta chain.	0.413
AS28_07258	IGLL1	A0A093NWL1	A0A093P651	Ig heavy chain V-II region WAH.	Ig lambda chain V-1 region.	0.596
AS28_07258	VPREB3	A0A093NWL1	A0A093PCD4	Ig heavy chain V-II region WAH.	Pre-B lymphocyte protein 3.	0.515
AS28_07259	AS28_08482	A0A093P8G4	A0A093PI65	Ig heavy chain V-III region DOB.	Ig lambda chain V-1 region.	0.684
AS28_07259	AS28_08483	A0A093P8G4	A0A093P4F7	Ig heavy chain V-III region DOB.	Ig lambda chain V-1 region.	0.684
AS28_07259	AS28_09491	A0A093P8G4	A0A093P3J1	Ig heavy chain V-III region DOB.	Tyrosine-protein kinase.	0.419
AS28_07259	AS28_09824	A0A093P8G4	A0A093NKV2	Ig heavy chain V-III region DOB.	Ig heavy chain V region 1B43.	0.485
AS28_07259	CD79B	A0A093P8G4	A0A093NS07	Ig heavy chain V-III region DOB.	B-cell antigen receptor complex-associated protein beta chain.	0.460
AS28_07259	GRB2	A0A093P8G4	A0A093NQ58	Ig heavy chain V-III region DOB.	Growth factor receptor-bound protein 2.	0.411