34 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_10312	Adenosine monophosphate-protein transferase FICD. (452 aa)
	N300_01946	V(D)J recombination-activating protein 2. (528 aa)
	N300_15029	Uncharacterized protein. (246 aa)
	N300_08072	Uncharacterized protein. (246 aa)
	N300_08073	Uncharacterized protein. (246 aa)
	N300_12600	LYR motif-containing protein 4; Belongs to the complex I LYR family. (42 aa)
	N300_03400	Uncharacterized protein. (234 aa)
	N300_13724	Uncharacterized protein. (246 aa)
	N300_09706	Uncharacterized protein. (246 aa)
	N300_09775	PR domain zinc finger protein 10. (212 aa)
	N300_09096	Uncharacterized protein. (245 aa)
	N300_13210	Uncharacterized protein. (123 aa)
	N300_07328	Uncharacterized protein. (99 aa)
	N300_11256	Uncharacterized protein. (246 aa)
	N300_11411	Uncharacterized protein. (234 aa)
	N300_10037	Uncharacterized protein. (246 aa)
	N300_01947	V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...] (1029 aa)
	N300_11676	Uncharacterized protein. (47 aa)
	N300_13057	Sulfate transporter; Sulfate transporter. May play a role in endochondral bone formation; Belongs to the SLC26A/SulP transporter (TC 2.A.53) family. (673 aa)
	N300_10168	Uncharacterized protein. (231 aa)
	N300_08071	Uncharacterized protein. (247 aa)
	N300_05568	CYTB_CTER domain-containing protein. (49 aa)
	N300_04824	High mobility group protein B2. (208 aa)
	N300_14044	Uncharacterized protein. (246 aa)
	N300_01777	Uncharacterized protein. (243 aa)
	N300_03145	Uncharacterized protein. (246 aa)
	N300_05754	Uncharacterized protein. (246 aa)
	N300_05932	Centrosomal protein of 104 kDa. (938 aa)
	N300_09774	Zinc finger protein PLAGL1. (473 aa)
	N300_09073	Uncharacterized protein. (246 aa)
	N300_13058	Sulfate transporter. (641 aa)
	N300_11680	Uncharacterized protein. (246 aa)
	N300_05544	Ankyrin repeat domain-containing protein 34C. (492 aa)
	N300_06842	Uncharacterized protein KIAA0556. (1149 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_01777	N300_01946	A0A091IHP3	A0A091HLR2	Uncharacterized protein.	V(D)J recombination-activating protein 2.	0.551
N300_01777	N300_05568	A0A091IHP3	A0A091IG54	Uncharacterized protein.	CYTB_CTER domain-containing protein.	0.539
N300_01777	N300_12600	A0A091IHP3	A0A091HVI0	Uncharacterized protein.	LYR motif-containing protein 4; Belongs to the complex I LYR family.	0.539
N300_01946	N300_01777	A0A091HLR2	A0A091IHP3	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_01947	A0A091HLR2	A0A091I8R8	V(D)J recombination-activating protein 2.	V(D)J recombination-activating protein 1; Catalytic component of the RAG complex, a multiprotein complex that mediates the DNA cleavage phase during V(D)J recombination. V(D)J recombination assembles a diverse repertoire of immunoglobulin and T-cell receptor genes in developing B and T- lymphocytes through rearrangement of different V (variable), in some cases D (diversity), and J (joining) gene segments. In the RAG complex, RAG1 mediates the DNA-binding to the conserved recombination signal sequences (RSS) and catalyzes the DNA cleavage activities by introducing a double-strand break [...]	0.997
N300_01946	N300_03145	A0A091HLR2	A0A091IJ13	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_03400	A0A091HLR2	A0A091HVN2	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_04824	A0A091HLR2	A0A091IH21	V(D)J recombination-activating protein 2.	High mobility group protein B2.	0.517
N300_01946	N300_05568	A0A091HLR2	A0A091IG54	V(D)J recombination-activating protein 2.	CYTB_CTER domain-containing protein.	0.481
N300_01946	N300_05754	A0A091HLR2	A0A091IJZ4	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_07328	A0A091HLR2	A0A091I4D4	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_08071	A0A091HLR2	A0A091IEC1	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_08072	A0A091HLR2	A0A091HQA4	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_08073	A0A091HLR2	A0A091HSI4	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_09073	A0A091HLR2	A0A091IQL0	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_09096	A0A091HLR2	A0A091I3C5	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_09706	A0A091HLR2	A0A091HWS9	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_10037	A0A091HLR2	A0A091I8L2	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_10168	A0A091HLR2	A0A091IDK8	V(D)J recombination-activating protein 2.	Uncharacterized protein.	0.551
N300_01946	N300_10312	A0A091HLR2	A0A091HL32	V(D)J recombination-activating protein 2.	Adenosine monophosphate-protein transferase FICD.	0.453