6 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_00666	Serine/arginine-rich splicing factor 11. (415 aa)
	N300_03328	RNA-binding protein 39. (522 aa)
	N300_02207	Putative RNA-binding protein 23. (233 aa)
	N300_07296	Protein SON. (460 aa)
	N300_05867	Serine/arginine repetitive matrix protein 1. (938 aa)
	N300_10741	RNA-binding protein 25. (831 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00666	N300_02207	A0A091HMI0	A0A091HZU4	Serine/arginine-rich splicing factor 11.	Putative RNA-binding protein 23.	0.640
N300_00666	N300_03328	A0A091HMI0	A0A091HQ27	Serine/arginine-rich splicing factor 11.	RNA-binding protein 39.	0.640
N300_00666	N300_05867	A0A091HMI0	A0A091IHN5	Serine/arginine-rich splicing factor 11.	Serine/arginine repetitive matrix protein 1.	0.767
N300_00666	N300_10741	A0A091HMI0	A0A091J860	Serine/arginine-rich splicing factor 11.	RNA-binding protein 25.	0.731
N300_02207	N300_00666	A0A091HZU4	A0A091HMI0	Putative RNA-binding protein 23.	Serine/arginine-rich splicing factor 11.	0.640
N300_02207	N300_05867	A0A091HZU4	A0A091IHN5	Putative RNA-binding protein 23.	Serine/arginine repetitive matrix protein 1.	0.731
N300_02207	N300_07296	A0A091HZU4	A0A091I6M7	Putative RNA-binding protein 23.	Protein SON.	0.902
N300_02207	N300_10741	A0A091HZU4	A0A091J860	Putative RNA-binding protein 23.	RNA-binding protein 25.	0.914
N300_03328	N300_00666	A0A091HQ27	A0A091HMI0	RNA-binding protein 39.	Serine/arginine-rich splicing factor 11.	0.640
N300_03328	N300_05867	A0A091HQ27	A0A091IHN5	RNA-binding protein 39.	Serine/arginine repetitive matrix protein 1.	0.732
N300_03328	N300_07296	A0A091HQ27	A0A091I6M7	RNA-binding protein 39.	Protein SON.	0.902
N300_03328	N300_10741	A0A091HQ27	A0A091J860	RNA-binding protein 39.	RNA-binding protein 25.	0.914
N300_05867	N300_00666	A0A091IHN5	A0A091HMI0	Serine/arginine repetitive matrix protein 1.	Serine/arginine-rich splicing factor 11.	0.767
N300_05867	N300_02207	A0A091IHN5	A0A091HZU4	Serine/arginine repetitive matrix protein 1.	Putative RNA-binding protein 23.	0.731
N300_05867	N300_03328	A0A091IHN5	A0A091HQ27	Serine/arginine repetitive matrix protein 1.	RNA-binding protein 39.	0.732
N300_05867	N300_07296	A0A091IHN5	A0A091I6M7	Serine/arginine repetitive matrix protein 1.	Protein SON.	0.479
N300_05867	N300_10741	A0A091IHN5	A0A091J860	Serine/arginine repetitive matrix protein 1.	RNA-binding protein 25.	0.970
N300_07296	N300_02207	A0A091I6M7	A0A091HZU4	Protein SON.	Putative RNA-binding protein 23.	0.902
N300_07296	N300_03328	A0A091I6M7	A0A091HQ27	Protein SON.	RNA-binding protein 39.	0.902
N300_07296	N300_05867	A0A091I6M7	A0A091IHN5	Protein SON.	Serine/arginine repetitive matrix protein 1.	0.479