(6 nodes) Mixed, incl. Reelin signalling pathway, and Receptor-mediated endocytosis involved in cholesterol transport network (Calypte anna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_08380	Low density lipoprotein receptor adapter protein 1. (150 aa)
	N300_03028	Low-density lipoprotein receptor-related protein 1B. (137 aa)
	N300_00614	Disabled 1. (530 aa)
	N300_04356	Very low-density lipoprotein receptor. (827 aa)
	N300_03027	Low-density lipoprotein receptor-related protein 1B. (94 aa)
	N300_05858	Low density lipoprotein receptor adapter protein 1. (124 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00614	N300_03027	A0A091I955	A0A091INL7	Disabled 1.	Low-density lipoprotein receptor-related protein 1B.	0.638
N300_00614	N300_03028	A0A091I955	A0A091HZ61	Disabled 1.	Low-density lipoprotein receptor-related protein 1B.	0.638
N300_00614	N300_04356	A0A091I955	A0A091II34	Disabled 1.	Very low-density lipoprotein receptor.	0.936
N300_00614	N300_05858	A0A091I955	A0A091J4Z7	Disabled 1.	Low density lipoprotein receptor adapter protein 1.	0.558
N300_00614	N300_08380	A0A091I955	A0A091HV61	Disabled 1.	Low density lipoprotein receptor adapter protein 1.	0.558
N300_03027	N300_00614	A0A091INL7	A0A091I955	Low-density lipoprotein receptor-related protein 1B.	Disabled 1.	0.638
N300_03027	N300_03028	A0A091INL7	A0A091HZ61	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein 1B.	0.900
N300_03027	N300_04356	A0A091INL7	A0A091II34	Low-density lipoprotein receptor-related protein 1B.	Very low-density lipoprotein receptor.	0.885
N300_03027	N300_05858	A0A091INL7	A0A091J4Z7	Low-density lipoprotein receptor-related protein 1B.	Low density lipoprotein receptor adapter protein 1.	0.522
N300_03027	N300_08380	A0A091INL7	A0A091HV61	Low-density lipoprotein receptor-related protein 1B.	Low density lipoprotein receptor adapter protein 1.	0.522
N300_03028	N300_00614	A0A091HZ61	A0A091I955	Low-density lipoprotein receptor-related protein 1B.	Disabled 1.	0.638
N300_03028	N300_03027	A0A091HZ61	A0A091INL7	Low-density lipoprotein receptor-related protein 1B.	Low-density lipoprotein receptor-related protein 1B.	0.900
N300_03028	N300_04356	A0A091HZ61	A0A091II34	Low-density lipoprotein receptor-related protein 1B.	Very low-density lipoprotein receptor.	0.900
N300_03028	N300_05858	A0A091HZ61	A0A091J4Z7	Low-density lipoprotein receptor-related protein 1B.	Low density lipoprotein receptor adapter protein 1.	0.522
N300_03028	N300_08380	A0A091HZ61	A0A091HV61	Low-density lipoprotein receptor-related protein 1B.	Low density lipoprotein receptor adapter protein 1.	0.522
N300_04356	N300_00614	A0A091II34	A0A091I955	Very low-density lipoprotein receptor.	Disabled 1.	0.936
N300_04356	N300_03027	A0A091II34	A0A091INL7	Very low-density lipoprotein receptor.	Low-density lipoprotein receptor-related protein 1B.	0.885
N300_04356	N300_03028	A0A091II34	A0A091HZ61	Very low-density lipoprotein receptor.	Low-density lipoprotein receptor-related protein 1B.	0.900
N300_04356	N300_05858	A0A091II34	A0A091J4Z7	Very low-density lipoprotein receptor.	Low density lipoprotein receptor adapter protein 1.	0.900
N300_04356	N300_08380	A0A091II34	A0A091HV61	Very low-density lipoprotein receptor.	Low density lipoprotein receptor adapter protein 1.	0.810