55 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_10087	Inhibin alpha chain; Inhibins and activins inhibit and activate, respectively, the secretion of follitropin by the pituitary gland. Inhibins/activins are involved in regulating a number of diverse functions such as hypothalamic and pituitary hormone secretion, gonadal hormone secretion, germ cell development and maturation, erythroid differentiation, insulin secretion, nerve cell survival, embryonic axial development or bone growth, depending on their subunit composition; Belongs to the TGF-beta family. (330 aa)
	N300_12655	Ski-like. (689 aa)
	N300_04007	Zinc finger FYVE domain-containing protein 9. (82 aa)
	N300_08509	Mothers against decapentaplegic 7. (181 aa)
	N300_00867	Transforming growth factor beta receptor type 3. (826 aa)
	N300_10392	Growth/differentiation factor 6. (307 aa)
	N300_11719	Nodal. (307 aa)
	N300_12588	Bone morphogenetic protein 6. (296 aa)
	N300_13743	Zinc finger FYVE domain-containing protein 16. (289 aa)
	N300_09513	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (324 aa)
	N300_13393	Chordin. (445 aa)
	N300_06983	Gremlin-2. (168 aa)
	N300_05006	E3 ubiquitin-protein ligase SMURF2. (742 aa)
	N300_02039	Gremlin. (184 aa)
	N300_06684	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (1031 aa)
	N300_01194	Bone morphogenetic protein 5. (453 aa)
	N300_10406	Mothers against decapentaplegic 7. (196 aa)
	N300_11456	Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
	N300_12331	Cryptic protein. (188 aa)
	N300_08561	Mothers against decapentaplegic homolog. (468 aa)
	N300_09422	Bone morphogenetic protein 8A. (296 aa)
	N300_03644	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (524 aa)
	N300_15748	Bone morphogenetic protein 7. (350 aa)
	N300_14661	Inhibin beta A chain. (424 aa)
	N300_05492	Follistatin. (316 aa)
	N300_05640	Transforming growth factor beta-3. (295 aa)
	N300_06358	TGF_BETA_2 domain-containing protein. (281 aa)
	N300_13497	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (502 aa)
	N300_00725	E3 ubiquitin-protein ligase HECW1. (1549 aa)
	N300_03053	Mothers against decapentaplegic homolog. (451 aa)
	N300_05175	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (457 aa)
	N300_11998	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (464 aa)
	N300_13453	Left-right determination factor 2. (356 aa)
	N300_03314	Growth/differentiation factor 5. (500 aa)
	N300_07760	Bone morphogenetic protein 2. (352 aa)
	N300_15279	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (435 aa)
	N300_05580	Mothers against decapentaplegic 6. (167 aa)
	N300_07783	Derriere protein. (279 aa)
	N300_01585	Bone morphogenetic protein 4. (359 aa)
	N300_02214	Mothers against decapentaplegic homolog. (469 aa)
	N300_11999	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (495 aa)
	N300_05196	Mothers against decapentaplegic homolog. (476 aa)
	N300_07529	Dorsalin-1. (425 aa)
	N300_07516	Bone morphogenetic protein 7. (352 aa)
	N300_13744	Zinc finger FYVE domain-containing protein 16. (1201 aa)
	N300_05888	Ski oncogene. (716 aa)
	N300_06007	5-hydroxytryptamine receptor 6; Belongs to the G-protein coupled receptor 1 family. (356 aa)
	N300_07601	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (491 aa)
	N300_02894	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (494 aa)
	N300_13392	Chordin. (54 aa)
	N300_04865	Noggin. (216 aa)
	N300_13485	Mothers against decapentaplegic homolog. (460 aa)
	N300_09538	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (470 aa)
	N300_11671	Muellerian-inhibiting factor. (399 aa)
	N300_05579	Mothers against decapentaplegic homolog. (460 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00725	N300_01585	A0A091ICB0	A0A091IGH4	E3 ubiquitin-protein ligase HECW1.	Bone morphogenetic protein 4.	0.456
N300_00725	N300_02214	A0A091ICB0	A0A091IGP4	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic homolog.	0.648
N300_00725	N300_02894	A0A091ICB0	A0A091IKZ9	E3 ubiquitin-protein ligase HECW1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.481
N300_00725	N300_03053	A0A091ICB0	A0A091ICC0	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic homolog.	0.648
N300_00725	N300_03644	A0A091ICB0	A0A091I7H8	E3 ubiquitin-protein ligase HECW1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.545
N300_00725	N300_05006	A0A091ICB0	A0A091HZU0	E3 ubiquitin-protein ligase HECW1.	E3 ubiquitin-protein ligase SMURF2.	0.724
N300_00725	N300_05175	A0A091ICB0	A0A091ID58	E3 ubiquitin-protein ligase HECW1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.539
N300_00725	N300_05196	A0A091ICB0	A0A091IHD1	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic homolog.	0.648
N300_00725	N300_05579	A0A091ICB0	A0A091J679	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic homolog.	0.648
N300_00725	N300_05580	A0A091ICB0	A0A091IG66	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic 6.	0.739
N300_00725	N300_06358	A0A091ICB0	A0A091IBT1	E3 ubiquitin-protein ligase HECW1.	TGF_BETA_2 domain-containing protein.	0.456
N300_00725	N300_06684	A0A091ICB0	A0A091I2S0	E3 ubiquitin-protein ligase HECW1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.531
N300_00725	N300_07601	A0A091ICB0	A0A091IK18	E3 ubiquitin-protein ligase HECW1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.545
N300_00725	N300_08509	A0A091ICB0	A0A091HNK5	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic 7.	0.739
N300_00725	N300_08561	A0A091ICB0	A0A091I6W7	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic homolog.	0.648
N300_00725	N300_09513	A0A091ICB0	A0A091HX00	E3 ubiquitin-protein ligase HECW1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.539
N300_00725	N300_09538	A0A091ICB0	A0A091IS52	E3 ubiquitin-protein ligase HECW1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.539
N300_00725	N300_10392	A0A091ICB0	A0A091HTN6	E3 ubiquitin-protein ligase HECW1.	Growth/differentiation factor 6.	0.456
N300_00725	N300_10406	A0A091ICB0	A0A091I4Z1	E3 ubiquitin-protein ligase HECW1.	Mothers against decapentaplegic 7.	0.739
N300_00725	N300_11998	A0A091ICB0	A0A091IDB0	E3 ubiquitin-protein ligase HECW1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.539