(17 nodes) Organellar large ribosomal subunit, and Ribosomal protein L14P network (Calypte anna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_10554	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family. (186 aa)
	N300_08486	Uncharacterized protein. (69 aa)
	N300_06100	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family. (139 aa)
	N300_10651	Uncharacterized protein. (155 aa)
	N300_10373	Uncharacterized protein. (253 aa)
	N300_05098	Uncharacterized protein. (199 aa)
	N300_12149	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family. (242 aa)
	N300_11372	Uncharacterized protein. (38 aa)
	N300_07290	Uncharacterized protein. (106 aa)
	N300_00726	Uncharacterized protein. (182 aa)
	N300_05386	Ribosomal_L2_C domain-containing protein. (203 aa)
	N300_13040	60S ribosomal protein L26. (146 aa)
	N300_02481	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. (77 aa)
	N300_13888	Ribosomal_L16 domain-containing protein. (154 aa)
	N300_05907	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family. (149 aa)
	N300_04896	Uncharacterized protein. (131 aa)
	N300_12872	Ribosomal_L18e/L15P domain-containing protein. (262 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00726	N300_02481	A0A091I926	A0A091ICB5	Uncharacterized protein.	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	0.999
N300_00726	N300_04896	A0A091I926	A0A091INZ8	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_05098	A0A091I926	A0A091I243	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_05386	A0A091I926	A0A091IB48	Uncharacterized protein.	Ribosomal_L2_C domain-containing protein.	0.995
N300_00726	N300_05907	A0A091I926	A0A091IIA6	Uncharacterized protein.	Uncharacterized protein; Belongs to the bacterial ribosomal protein bL20 family.	0.999
N300_00726	N300_06100	A0A091I926	A0A091HMH9	Uncharacterized protein.	60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.	0.999
N300_00726	N300_07290	A0A091I926	A0A091I6M3	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_08486	A0A091I926	A0A091HLV8	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_10373	A0A091I926	A0A091HTQ1	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_10554	A0A091I926	A0A091HJ92	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.995
N300_00726	N300_10651	A0A091I926	A0A091HPE1	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_11372	A0A091I926	A0A091I6D2	Uncharacterized protein.	Uncharacterized protein.	0.999
N300_00726	N300_12149	A0A091I926	A0A091I562	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.	0.993
N300_00726	N300_12872	A0A091I926	A0A091IVX5	Uncharacterized protein.	Ribosomal_L18e/L15P domain-containing protein.	0.995
N300_00726	N300_13040	A0A091I926	A0A091IBA7	Uncharacterized protein.	60S ribosomal protein L26.	0.999
N300_00726	N300_13888	A0A091I926	A0A091IFJ6	Uncharacterized protein.	Ribosomal_L16 domain-containing protein.	0.993
N300_02481	N300_00726	A0A091ICB5	A0A091I926	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
N300_02481	N300_04896	A0A091ICB5	A0A091INZ8	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
N300_02481	N300_05098	A0A091ICB5	A0A091I243	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
N300_02481	N300_05386	A0A091ICB5	A0A091IB48	40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family.	Ribosomal_L2_C domain-containing protein.	0.988