STRINGSTRING
N300_09124 N300_09124 N300_07034 N300_07034 N300_08926 N300_08926 N300_11706 N300_11706 N300_00809 N300_00809 N300_06952 N300_06952 N300_07387 N300_07387 N300_06686 N300_06686 N300_15551 N300_15551 N300_03617 N300_03617 N300_02881 N300_02881 N300_12097 N300_12097 N300_00832 N300_00832 N300_08339 N300_08339 N300_14367 N300_14367 N300_07489 N300_07489 N300_05992 N300_05992 N300_06420 N300_06420 N300_15494 N300_15494 N300_06013 N300_06013 N300_13610 N300_13610 N300_11951 N300_11951 N300_03668 N300_03668
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N300_0912460S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 34S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (180 aa)
N300_07034Ribosome production factor 2. (298 aa)
N300_08926Ribosomal L1 domain-containing protein 1. (238 aa)
N300_11706Protein MAK16. (284 aa)
N300_00809Putative rRNA-processing protein EBP2. (253 aa)
N300_06952CCAAT/enhancer-binding protein zeta. (1015 aa)
N300_07387Ribosome biogenesis protein BRX1. (297 aa)
N300_06686Ribosome biogenesis protein WDR12. (411 aa)
N300_15551Ribosome biogenesis protein NSA2. (196 aa)
N300_03617MKI67 FHA domain-interacting nucleolar phosphoprotein. (206 aa)
N300_02881Pre-rRNA processing protein FTSJ3. (178 aa)
N300_12097Ribosomal RNA processing protein 1 B. (712 aa)
N300_00832Ribosome production factor 1. (273 aa)
N300_08339Ribosome biogenesis protein bop1. (603 aa)
N300_14367Pescadillo. (554 aa)
N300_07489Nucleolar complex protein 3. (794 aa)
N300_05992Nucleolar complex protein 2. (621 aa)
N300_06420Putative methyltransferase NSUN6; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (469 aa)
N300_15494Nucleolar GTP-binding protein 2; GTPase that associates with pre-60S ribosomal subunits in the nucleolus and is required for their nuclear export and maturation. Belongs to the TRAFAC class YlqF/YawG GTPase family. NOG2 subfamily. (722 aa)
N300_06013Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (180 aa)
N300_13610Nucleolar GTP-binding protein 1. (630 aa)
N300_11951Putative ribosome biogenesis protein RLP24. (137 aa)
N300_03668RNA helicase. (542 aa)
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.