31 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_04884	Luc7-like 3. (431 aa)
	N300_06826	Putative RNA-binding protein Luc7-like 1. (350 aa)
	N300_05469	U4/U6.U5 tri-snRNP-associated protein 2. (421 aa)
	N300_02373	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (460 aa)
	N300_05877	Splicing factor 3A subunit 3. (457 aa)
	N300_08212	Splicing factor, suppressor of white-apricot. (927 aa)
	N300_13893	Pre-mRNA-processing factor 19. (477 aa)
	N300_05163	YTH domain-containing protein 1. (687 aa)
	N300_03795	SRSF protein kinase 1. (598 aa)
	N300_03752	U1 small nuclear ribonucleoprotein C. (157 aa)
	N300_02526	CUGBP Elav-like family member 5. (400 aa)
	N300_11670	Uncharacterized protein. (111 aa)
	N300_14549	CUGBP Elav-like family member 4. (361 aa)
	N300_11669	Splicing factor 3A subunit 2. (205 aa)
	N300_12568	CUGBP Elav-like family member 1. (515 aa)
	N300_14550	CUGBP Elav-like family member 4. (128 aa)
	N300_04443	Serine/threonine-protein kinase SRPK; Belongs to the protein kinase superfamily. (366 aa)
	N300_15513	Lens epithelium-derived growth factor. (562 aa)
	N300_14642	UPF0469 protein KIAA0907. (524 aa)
	N300_12305	Protein SCAF11. (711 aa)
	N300_00508	CUGBP Elav-like family member 2. (494 aa)
	N300_00439	SRSF protein kinase 2. (615 aa)
	N300_00900	Polypyrimidine tract-binding protein 2. (519 aa)
	N300_09385	Putative helicase senataxin. (2438 aa)
	N300_08345	Poly(U)-binding-splicing factor PUF60. (522 aa)
	N300_05371	Gem-associated protein 6. (167 aa)
	N300_05679	Gem-associated protein 2; The SMN complex plays a catalyst role in the assembly of small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. Thereby, plays an important role in the splicing of cellular pre-mRNAs; Belongs to the gemin-2 family. (263 aa)
	N300_13152	Putative RNA-binding protein Luc7-like 2. (378 aa)
	N300_10967	Pre-mRNA-splicing factor ISY1. (218 aa)
	N300_04001	CUGBP Elav-like family member 4. (95 aa)
	N300_04000	CUGBP Elav-like family member 3. (354 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00439	N300_02373	A0A091HWE7	A0A091IPK5	SRSF protein kinase 2.	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	0.493
N300_00439	N300_06826	A0A091HWE7	A0A091J881	SRSF protein kinase 2.	Putative RNA-binding protein Luc7-like 1.	0.410
N300_00439	N300_13152	A0A091HWE7	A0A091HLR4	SRSF protein kinase 2.	Putative RNA-binding protein Luc7-like 2.	0.410
N300_00508	N300_00900	A0A091HWN0	A0A091HU32	CUGBP Elav-like family member 2.	Polypyrimidine tract-binding protein 2.	0.427
N300_00508	N300_14549	A0A091HWN0	A0A091I9Z0	CUGBP Elav-like family member 2.	CUGBP Elav-like family member 4.	0.448
N300_00900	N300_00508	A0A091HU32	A0A091HWN0	Polypyrimidine tract-binding protein 2.	CUGBP Elav-like family member 2.	0.427
N300_00900	N300_08345	A0A091HU32	A0A091HSR3	Polypyrimidine tract-binding protein 2.	Poly(U)-binding-splicing factor PUF60.	0.512
N300_02373	N300_00439	A0A091IPK5	A0A091HWE7	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	SRSF protein kinase 2.	0.493
N300_02373	N300_03752	A0A091IPK5	A0A091ICJ4	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	U1 small nuclear ribonucleoprotein C.	0.464
N300_02373	N300_03795	A0A091IPK5	A0A091ICZ8	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	SRSF protein kinase 1.	0.493
N300_02373	N300_04443	A0A091IPK5	A0A091I6G1	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Serine/threonine-protein kinase SRPK; Belongs to the protein kinase superfamily.	0.469
N300_02373	N300_05877	A0A091IPK5	A0A091IHP8	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Splicing factor 3A subunit 3.	0.711
N300_02373	N300_10967	A0A091IPK5	A0A091HJZ9	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Pre-mRNA-splicing factor ISY1.	0.475
N300_02373	N300_11669	A0A091IPK5	A0A091I793	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Splicing factor 3A subunit 2.	0.535
N300_02373	N300_11670	A0A091IPK5	A0A091IAR7	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Uncharacterized protein.	0.535
N300_02373	N300_13893	A0A091IPK5	A0A091IFK4	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	Pre-mRNA-processing factor 19.	0.577
N300_03752	N300_02373	A0A091ICJ4	A0A091IPK5	U1 small nuclear ribonucleoprotein C.	U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2.	0.464
N300_03752	N300_04884	A0A091ICJ4	A0A091I1Q3	U1 small nuclear ribonucleoprotein C.	Luc7-like 3.	0.835
N300_03752	N300_05469	A0A091ICJ4	A0A091IR87	U1 small nuclear ribonucleoprotein C.	U4/U6.U5 tri-snRNP-associated protein 2.	0.686
N300_03752	N300_05877	A0A091ICJ4	A0A091IHP8	U1 small nuclear ribonucleoprotein C.	Splicing factor 3A subunit 3.	0.954