25 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_05947	Polynucleotide 5'-hydroxyl-kinase NOL9. (310 aa)
	N300_13610	Nucleolar GTP-binding protein 1. (630 aa)
	N300_09881	Ribosomal biogenesis protein LAS1L. (180 aa)
	N300_07034	Ribosome production factor 2. (298 aa)
	N300_00846	Box C/D snoRNA protein 1. (268 aa)
	N300_09350	60S ribosomal protein L35. (76 aa)
	N300_03311	Eukaryotic translation initiation factor 6. (179 aa)
	N300_08926	Ribosomal L1 domain-containing protein 1. (238 aa)
	N300_11706	Protein MAK16. (284 aa)
	N300_12132	60S ribosomal protein L7. (240 aa)
	N300_11140	Zinc finger HIT domain-containing protein 3. (91 aa)
	N300_06686	Ribosome biogenesis protein WDR12. (411 aa)
	N300_11455	RRP15-like. (248 aa)
	N300_03668	RNA helicase. (542 aa)
	N300_07312	Nucleolar pre-ribosomal-associated protein 1. (2219 aa)
	N300_15551	Ribosome biogenesis protein NSA2. (196 aa)
	N300_02092	Uncharacterized protein. (213 aa)
	N300_03617	MKI67 FHA domain-interacting nucleolar phosphoprotein. (206 aa)
	N300_08814	60S ribosomal protein L7a. (206 aa)
	N300_02881	Pre-rRNA processing protein FTSJ3. (178 aa)
	N300_01764	60S ribosomal protein L7-like 1. (242 aa)
	N300_00832	Ribosome production factor 1. (273 aa)
	N300_09880	Ribosomal biogenesis protein LAS1L. (198 aa)
	N300_08339	Ribosome biogenesis protein bop1. (603 aa)
	N300_14367	Pescadillo. (554 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00832	N300_01764	A0A091IFU6	A0A091IFG3	Ribosome production factor 1.	60S ribosomal protein L7-like 1.	0.931
N300_00832	N300_02881	A0A091IFU6	A0A091IBM1	Ribosome production factor 1.	Pre-rRNA processing protein FTSJ3.	0.979
N300_00832	N300_03311	A0A091IFU6	A0A091HS81	Ribosome production factor 1.	Eukaryotic translation initiation factor 6.	0.968
N300_00832	N300_03617	A0A091IFU6	A0A091I578	Ribosome production factor 1.	MKI67 FHA domain-interacting nucleolar phosphoprotein.	0.998
N300_00832	N300_03668	A0A091IFU6	A0A091IUX1	Ribosome production factor 1.	RNA helicase.	0.991
N300_00832	N300_06686	A0A091IFU6	A0A091I1T2	Ribosome production factor 1.	Ribosome biogenesis protein WDR12.	0.988
N300_00832	N300_07034	A0A091IFU6	A0A091HN92	Ribosome production factor 1.	Ribosome production factor 2.	0.990
N300_00832	N300_08339	A0A091IFU6	A0A091IGU6	Ribosome production factor 1.	Ribosome biogenesis protein bop1.	0.985
N300_00832	N300_08814	A0A091IFU6	A0A091I846	Ribosome production factor 1.	60S ribosomal protein L7a.	0.919
N300_00832	N300_08926	A0A091IFU6	A0A091HSW0	Ribosome production factor 1.	Ribosomal L1 domain-containing protein 1.	0.990
N300_00832	N300_09350	A0A091IFU6	A0A091HS28	Ribosome production factor 1.	60S ribosomal protein L35.	0.894
N300_00832	N300_11455	A0A091IFU6	A0A091I373	Ribosome production factor 1.	RRP15-like.	0.980
N300_00832	N300_11706	A0A091IFU6	A0A091HSW1	Ribosome production factor 1.	Protein MAK16.	0.997
N300_00832	N300_12132	A0A091IFU6	A0A091HTS5	Ribosome production factor 1.	60S ribosomal protein L7.	0.931
N300_00832	N300_13610	A0A091IFU6	A0A091IM11	Ribosome production factor 1.	Nucleolar GTP-binding protein 1.	0.986
N300_00832	N300_14367	A0A091IFU6	A0A091IHG5	Ribosome production factor 1.	Pescadillo.	0.987
N300_00832	N300_15551	A0A091IFU6	A0A091I3E0	Ribosome production factor 1.	Ribosome biogenesis protein NSA2.	0.983
N300_00846	N300_03311	A0A091HQR5	A0A091HS81	Box C/D snoRNA protein 1.	Eukaryotic translation initiation factor 6.	0.400
N300_00846	N300_11140	A0A091HQR5	A0A091HUS4	Box C/D snoRNA protein 1.	Zinc finger HIT domain-containing protein 3.	0.597
N300_00846	N300_11706	A0A091HQR5	A0A091HSW1	Box C/D snoRNA protein 1.	Protein MAK16.	0.405