45 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_10631	p2X purinoceptor 3. (173 aa)
	N300_03873	DnaJ subfamily A member 2. (382 aa)
	N300_04254	Neurofibromin. (68 aa)
	N300_03545	Transient receptor potential cation channel subfamily V member 3; Belongs to the transient receptor (TC 1.A.4) family. (788 aa)
	N300_07442	BAG family molecular chaperone regulator 3. (497 aa)
	N300_13380	Translation initiation factor eIF-2B subunit epsilon. (658 aa)
	N300_14687	Nucleoprotein TPR. (2360 aa)
	N300_14325	Alpha-crystallin B chain; Belongs to the small heat shock protein (HSP20) family. (170 aa)
	N300_14304	Sodium channel subunit beta-2. (192 aa)
	N300_04380	DnaJ subfamily A member 4. (382 aa)
	N300_15885	Transient receptor potential cation channel subfamily M member 2. (1517 aa)
	N300_01311	Tumor protein p53-inducible nuclear protein 1. (237 aa)
	N300_04253	Neurofibromin. (76 aa)
	N300_15118	Toll-like receptor 2 type-2. (434 aa)
	N300_11857	Putative ATP-dependent RNA helicase DHX36. (913 aa)
	N300_09887	Heat shock factor protein 3. (425 aa)
	N300_03120	Uncharacterized protein C8orf4. (106 aa)
	N300_15402	Tyrosine-protein kinase. (513 aa)
	N300_03697	Myogenin. (187 aa)
	N300_12813	Phosphoinositide-interacting protein. (132 aa)
	N300_06597	Brain-derived neurotrophic factor; Promotes the survival of neuronal populations that are all located either in the central nervous system or directly connected to it; Belongs to the NGF-beta family. (246 aa)
	N300_15851	Heat shock protein HSP 90-alpha. (728 aa)
	N300_09004	DnaJ subfamily A member 1. (317 aa)
	N300_08646	Insulin-like growth factor I. (133 aa)
	N300_15513	Lens epithelium-derived growth factor. (562 aa)
	N300_06682	Small ubiquitin-related modifier. (98 aa)
	N300_12735	DnaJ subfamily A member 1. (324 aa)
	N300_13208	Protein Hikeshi. (180 aa)
	N300_01183	Glutamate--cysteine ligase catalytic subunit. (588 aa)
	N300_12196	Heat shock cognate protein HSP 90-beta. (727 aa)
	N300_03544	Transient receptor potential cation channel subfamily V member 1. (843 aa)
	N300_03451	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family. (143 aa)
	N300_03537	Transient receptor potential cation channel subfamily V member 2. (713 aa)
	N300_01481	cAMP-regulated phosphoprotein 21. (817 aa)
	N300_11905	Carboxypeptidase B2. (365 aa)
	N300_14324	Heat shock protein beta-2; Belongs to the small heat shock protein (HSP20) family. (179 aa)
	N300_14818	Transitional endoplasmic reticulum ATPase; Belongs to the AAA ATPase family. (706 aa)
	N300_08338	Heat shock factor protein 1. (124 aa)
	N300_01910	DNA-directed RNA polymerase II subunit RPB4. (120 aa)
	N300_03431	Heat shock factor-binding protein 1. (59 aa)
	N300_07888	Alpha-N-acetylneuraminide alpha-2,8-sialyltransferase; Belongs to the glycosyltransferase 29 family. (282 aa)
	N300_14564	14-3-3 protein epsilon; Belongs to the 14-3-3 family. (219 aa)
	N300_12094	Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family. (173 aa)
	N300_05717	Histone-binding protein RBBP7. (418 aa)
	N300_10330	Transient receptor potential cation channel subfamily V member 4. (828 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_03431	N300_03451	A0A091HTG8	A0A091I319	Heat shock factor-binding protein 1.	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	0.480
N300_03431	N300_03873	A0A091HTG8	A0A091J4C1	Heat shock factor-binding protein 1.	DnaJ subfamily A member 2.	0.427
N300_03431	N300_08338	A0A091HTG8	A0A091HUU1	Heat shock factor-binding protein 1.	Heat shock factor protein 1.	0.716
N300_03431	N300_09887	A0A091HTG8	A0A091IE63	Heat shock factor-binding protein 1.	Heat shock factor protein 3.	0.716
N300_03431	N300_12094	A0A091HTG8	A0A091HQA2	Heat shock factor-binding protein 1.	Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family.	0.469
N300_03431	N300_12196	A0A091HTG8	A0A091I415	Heat shock factor-binding protein 1.	Heat shock cognate protein HSP 90-beta.	0.594
N300_03431	N300_14324	A0A091HTG8	A0A091HXA1	Heat shock factor-binding protein 1.	Heat shock protein beta-2; Belongs to the small heat shock protein (HSP20) family.	0.469
N300_03431	N300_14325	A0A091HTG8	A0A091IJE2	Heat shock factor-binding protein 1.	Alpha-crystallin B chain; Belongs to the small heat shock protein (HSP20) family.	0.598
N300_03431	N300_15851	A0A091HTG8	A0A091IAJ0	Heat shock factor-binding protein 1.	Heat shock protein HSP 90-alpha.	0.594
N300_03451	N300_03431	A0A091I319	A0A091HTG8	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Heat shock factor-binding protein 1.	0.480
N300_03451	N300_07442	A0A091I319	A0A091IQ25	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	BAG family molecular chaperone regulator 3.	0.808
N300_03451	N300_08338	A0A091I319	A0A091HUU1	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Heat shock factor protein 1.	0.630
N300_03451	N300_09887	A0A091I319	A0A091IE63	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Heat shock factor protein 3.	0.630
N300_03451	N300_12094	A0A091I319	A0A091HQA2	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Alpha-crystallin A chain; Belongs to the small heat shock protein (HSP20) family.	0.903
N300_03451	N300_12196	A0A091I319	A0A091I415	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Heat shock cognate protein HSP 90-beta.	0.720
N300_03451	N300_14325	A0A091I319	A0A091IJE2	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Alpha-crystallin B chain; Belongs to the small heat shock protein (HSP20) family.	0.973
N300_03451	N300_14564	A0A091I319	A0A091HQB4	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	14-3-3 protein epsilon; Belongs to the 14-3-3 family.	0.434
N300_03451	N300_15851	A0A091I319	A0A091IAJ0	Heat shock protein beta-1; Belongs to the small heat shock protein (HSP20) family.	Heat shock protein HSP 90-alpha.	0.720
N300_03537	N300_15402	A0A091I069	A0A091ID16	Transient receptor potential cation channel subfamily V member 2.	Tyrosine-protein kinase.	0.477
N300_03537	N300_15885	A0A091I069	A0A091IG28	Transient receptor potential cation channel subfamily V member 2.	Transient receptor potential cation channel subfamily M member 2.	0.873