(32 nodes) Regulation of epithelial to mesenchymal transition network (Calypte anna)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_05236	Golgi-associated plant pathogenesis-related protein 1. (149 aa)
	N300_08509	Mothers against decapentaplegic 7. (181 aa)
	N300_12397	GDP-fucose protein O-fucosyltransferase 2. (387 aa)
	N300_08655	Lymphoid enhancer-binding factor 1. (315 aa)
	N300_13273	Basic helix-loop-helix domain-containing protein KIAA2018. (2211 aa)
	N300_00926	Noelin-3. (478 aa)
	N300_06465	BMP and activin membrane-bound inhibitor. (236 aa)
	N300_00510	GATA-binding factor 3. (444 aa)
	N300_01045	Interleukin-6. (152 aa)
	N300_05040	Transcription factor Sox-9. (417 aa)
	N300_01502	Catenin beta-1. (777 aa)
	N300_05100	Protein FAM195B. (93 aa)
	N300_14449	Pleckstrin homology-like domain family B member 2. (1225 aa)
	N300_10406	Mothers against decapentaplegic 7. (196 aa)
	N300_11456	Transforming growth factor beta; Belongs to the TGF-beta family. (412 aa)
	N300_08792	Noelin. (487 aa)
	N300_09491	Lysyl oxidase 2. (722 aa)
	N300_09950	Dystroglycan. (897 aa)
	N300_12831	Zinc finger protein 750. (715 aa)
	N300_05640	Transforming growth factor beta-3. (295 aa)
	N300_06358	TGF_BETA_2 domain-containing protein. (281 aa)
	N300_06370	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling. (1193 aa)
	N300_08868	Midkine. (143 aa)
	N300_08902	Epithelial membrane protein 2. (167 aa)
	N300_13606	Uncharacterized protein. (77 aa)
	N300_15279	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily. (435 aa)
	N300_11999	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (495 aa)
	N300_04806	T-box transcription factor TBX20. (172 aa)
	N300_07601	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (491 aa)
	N300_01483	CLIP-associating protein 2. (1457 aa)
	N300_04865	Noggin. (216 aa)
	N300_03616	CLIP-associating protein 1. (1473 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_01045	N300_11456	A0A091HXZ8	A0A091I6I9	Interleukin-6.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.405
N300_01483	N300_14449	A0A091IL68	A0A091I3N0	CLIP-associating protein 2.	Pleckstrin homology-like domain family B member 2.	0.537
N300_01502	N300_05040	A0A091HZ16	A0A091HYX8	Catenin beta-1.	Transcription factor Sox-9.	0.732
N300_01502	N300_06370	A0A091HZ16	A0A091IBU1	Catenin beta-1.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.442
N300_01502	N300_07601	A0A091HZ16	A0A091IK18	Catenin beta-1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.562
N300_01502	N300_08509	A0A091HZ16	A0A091HNK5	Catenin beta-1.	Mothers against decapentaplegic 7.	0.546
N300_01502	N300_08655	A0A091HZ16	A0A091HPF8	Catenin beta-1.	Lymphoid enhancer-binding factor 1.	0.996
N300_01502	N300_10406	A0A091HZ16	A0A091I4Z1	Catenin beta-1.	Mothers against decapentaplegic 7.	0.546
N300_01502	N300_11999	A0A091HZ16	A0A091IGW6	Catenin beta-1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.414
N300_01502	N300_15279	A0A091HZ16	A0A091IG30	Catenin beta-1.	Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.	0.620
N300_04865	N300_05640	A0A091INW1	A0A091IBJ2	Noggin.	Transforming growth factor beta-3.	0.600
N300_04865	N300_06358	A0A091INW1	A0A091IBT1	Noggin.	TGF_BETA_2 domain-containing protein.	0.956
N300_04865	N300_11456	A0A091INW1	A0A091I6I9	Noggin.	Transforming growth factor beta; Belongs to the TGF-beta family.	0.599
N300_05040	N300_01502	A0A091HYX8	A0A091HZ16	Transcription factor Sox-9.	Catenin beta-1.	0.732
N300_05040	N300_08655	A0A091HYX8	A0A091HPF8	Transcription factor Sox-9.	Lymphoid enhancer-binding factor 1.	0.633
N300_05640	N300_04865	A0A091IBJ2	A0A091INW1	Transforming growth factor beta-3.	Noggin.	0.600
N300_05640	N300_06370	A0A091IBJ2	A0A091IBU1	Transforming growth factor beta-3.	Delta-like protein; Putative Notch ligand involved in the mediation of Notch signaling.	0.475
N300_05640	N300_07601	A0A091IBJ2	A0A091IK18	Transforming growth factor beta-3.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.992
N300_05640	N300_08509	A0A091IBJ2	A0A091HNK5	Transforming growth factor beta-3.	Mothers against decapentaplegic 7.	0.505
N300_05640	N300_10406	A0A091IBJ2	A0A091I4Z1	Transforming growth factor beta-3.	Mothers against decapentaplegic 7.	0.505