15 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_10103	Interferon-induced helicase C domain-containing protein 1. (971 aa)
	N300_10910	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (487 aa)
	N300_06157	Putative ATP-dependent RNA helicase DHX58. (611 aa)
	N300_15246	Mitochondrial antiviral-signaling protein. (633 aa)
	N300_02353	Toll-like receptor 7; Belongs to the Toll-like receptor family. (1026 aa)
	N300_06282	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (314 aa)
	N300_02670	ATP-dependent RNA helicase A. (372 aa)
	N300_02669	ATP-dependent RNA helicase A. (855 aa)
	N300_12748	Putative ATP-dependent RNA helicase DDX58. (833 aa)
	N300_08623	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1100 aa)
	N300_01218	Zinc finger and BTB domain-containing protein 20. (738 aa)
	N300_12932	Serine/threonine-protein kinase RIO3. (495 aa)
	N300_15573	Mitochondrial import receptor subunit TOM70. (501 aa)
	N300_15116	Stimulator of interferon genes protein. (371 aa)
	N300_04824	High mobility group protein B2. (208 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_01218	N300_10910	A0A091I876	A0A091HK44	Zinc finger and BTB domain-containing protein 20.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.469
N300_02353	N300_10103	A0A091HZ53	A0A091HGC2	Toll-like receptor 7; Belongs to the Toll-like receptor family.	Interferon-induced helicase C domain-containing protein 1.	0.537
N300_02353	N300_10910	A0A091HZ53	A0A091HK44	Toll-like receptor 7; Belongs to the Toll-like receptor family.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.432
N300_02353	N300_12748	A0A091HZ53	A0A091I4Y0	Toll-like receptor 7; Belongs to the Toll-like receptor family.	Putative ATP-dependent RNA helicase DDX58.	0.422
N300_02353	N300_15246	A0A091HZ53	A0A091HXJ7	Toll-like receptor 7; Belongs to the Toll-like receptor family.	Mitochondrial antiviral-signaling protein.	0.489
N300_02669	N300_02670	A0A091I2E0	A0A091HZA7	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02669	N300_15246	A0A091I2E0	A0A091HXJ7	ATP-dependent RNA helicase A.	Mitochondrial antiviral-signaling protein.	0.458
N300_02670	N300_02669	A0A091HZA7	A0A091I2E0	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02670	N300_15246	A0A091HZA7	A0A091HXJ7	ATP-dependent RNA helicase A.	Mitochondrial antiviral-signaling protein.	0.458
N300_04824	N300_08623	A0A091IH21	A0A091I6Q0	High mobility group protein B2.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.480
N300_06157	N300_10103	A0A091HQS5	A0A091HGC2	Putative ATP-dependent RNA helicase DHX58.	Interferon-induced helicase C domain-containing protein 1.	0.957
N300_06157	N300_12748	A0A091HQS5	A0A091I4Y0	Putative ATP-dependent RNA helicase DHX58.	Putative ATP-dependent RNA helicase DDX58.	0.974
N300_06157	N300_15116	A0A091HQS5	A0A091ID95	Putative ATP-dependent RNA helicase DHX58.	Stimulator of interferon genes protein.	0.412
N300_06157	N300_15246	A0A091HQS5	A0A091HXJ7	Putative ATP-dependent RNA helicase DHX58.	Mitochondrial antiviral-signaling protein.	0.940
N300_06282	N300_08623	A0A091HZ85	A0A091I6Q0	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
N300_06282	N300_10910	A0A091HZ85	A0A091HK44	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
N300_08623	N300_04824	A0A091I6Q0	A0A091IH21	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	High mobility group protein B2.	0.480
N300_08623	N300_06282	A0A091I6Q0	A0A091HZ85	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family.	0.998
N300_08623	N300_10910	A0A091I6Q0	A0A091HK44	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.998
N300_10103	N300_02353	A0A091HGC2	A0A091HZ53	Interferon-induced helicase C domain-containing protein 1.	Toll-like receptor 7; Belongs to the Toll-like receptor family.	0.537