13 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_02462	40S ribosomal protein S29. (55 aa)
	N300_13609	La-related protein 4B. (701 aa)
	N300_07762	40S ribosomal protein S28. (55 aa)
	N300_03928	Nuclear receptor subfamily 0 group B member 1. (273 aa)
	N300_15150	Transcription factor BTF3; Belongs to the NAC-beta family. (138 aa)
	N300_15587	60S ribosomal protein L24. (156 aa)
	N300_03512	Nuclear fragile X mental retardation-interacting protein 2. (599 aa)
	N300_15560	Transcription factor BTF3; Belongs to the NAC-beta family. (106 aa)
	N300_02669	ATP-dependent RNA helicase A. (855 aa)
	N300_13910	Transcription factor BTF3; Belongs to the NAC-beta family. (159 aa)
	N300_02670	ATP-dependent RNA helicase A. (372 aa)
	N300_06104	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family. (195 aa)
	N300_10306	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family. (293 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_02462	N300_06104	A0A091HNC7	A0A091HNM5	40S ribosomal protein S29.	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
N300_02462	N300_07762	A0A091HNC7	A0A091IG85	40S ribosomal protein S29.	40S ribosomal protein S28.	0.999
N300_02462	N300_10306	A0A091HNC7	A0A091HL30	40S ribosomal protein S29.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
N300_02462	N300_13910	A0A091HNC7	A0A091I0I6	40S ribosomal protein S29.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.540
N300_02462	N300_15150	A0A091HNC7	A0A091IE06	40S ribosomal protein S29.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.540
N300_02462	N300_15560	A0A091HNC7	A0A091I2H3	40S ribosomal protein S29.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.540
N300_02462	N300_15587	A0A091HNC7	A0A091IDW8	40S ribosomal protein S29.	60S ribosomal protein L24.	0.999
N300_02669	N300_02670	A0A091I2E0	A0A091HZA7	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02669	N300_07762	A0A091I2E0	A0A091IG85	ATP-dependent RNA helicase A.	40S ribosomal protein S28.	0.581
N300_02670	N300_02669	A0A091HZA7	A0A091I2E0	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02670	N300_07762	A0A091HZA7	A0A091IG85	ATP-dependent RNA helicase A.	40S ribosomal protein S28.	0.581
N300_06104	N300_02462	A0A091HNM5	A0A091HNC7	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	40S ribosomal protein S29.	0.999
N300_06104	N300_07762	A0A091HNM5	A0A091IG85	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	40S ribosomal protein S28.	0.999
N300_06104	N300_10306	A0A091HNM5	A0A091HL30	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	60S ribosomal protein L6; Belongs to the eukaryotic ribosomal protein eL6 family.	0.999
N300_06104	N300_13910	A0A091HNM5	A0A091I0I6	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.843
N300_06104	N300_15150	A0A091HNM5	A0A091IE06	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.875
N300_06104	N300_15560	A0A091HNM5	A0A091I2H3	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	Transcription factor BTF3; Belongs to the NAC-beta family.	0.875
N300_06104	N300_15587	A0A091HNM5	A0A091IDW8	Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.	60S ribosomal protein L24.	0.999
N300_07762	N300_02462	A0A091IG85	A0A091HNC7	40S ribosomal protein S28.	40S ribosomal protein S29.	0.999
N300_07762	N300_02669	A0A091IG85	A0A091I2E0	40S ribosomal protein S28.	ATP-dependent RNA helicase A.	0.581