15 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_14199	Polycystin-1. (4245 aa)
	N300_00639	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family. (818 aa)
	N300_10709	Frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family. (514 aa)
	N300_01906	Tyrosine-protein kinase RYK. (478 aa)
	N300_13618	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family. (306 aa)
	N300_00957	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family. (329 aa)
	N300_06681	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family. (339 aa)
	N300_06690	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family. (395 aa)
	N300_11234	Frizzled-2; Belongs to the G-protein coupled receptor Fz/Smo family. (509 aa)
	N300_06297	Low-density lipoprotein receptor-related protein 5. (1540 aa)
	N300_01734	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family. (418 aa)
	N300_03906	Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family. (707 aa)
	N300_07248	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family. (466 aa)
	N300_08218	Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family. (564 aa)
	N300_02629	Low-density lipoprotein receptor-related protein 6. (1594 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00639	N300_00957	A0A091HMF0	A0A091IN43	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	0.826
N300_00639	N300_01734	A0A091HMF0	A0A091IFB1	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.885
N300_00639	N300_01906	A0A091HMF0	A0A091HR36	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Tyrosine-protein kinase RYK.	0.405
N300_00639	N300_02629	A0A091HMF0	A0A091IKC9	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Low-density lipoprotein receptor-related protein 6.	0.428
N300_00639	N300_03906	A0A091HMF0	A0A091IGF8	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family.	0.872
N300_00639	N300_06297	A0A091HMF0	A0A091I575	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Low-density lipoprotein receptor-related protein 5.	0.597
N300_00639	N300_06681	A0A091HMF0	A0A091I1T0	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-7; Belongs to the G-protein coupled receptor Fz/Smo family.	0.821
N300_00639	N300_06690	A0A091HMF0	A0A091I2S5	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.875
N300_00639	N300_07248	A0A091HMF0	A0A091IIC3	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Uncharacterized protein; Belongs to the G-protein coupled receptor Fz/Smo family.	0.819
N300_00639	N300_08218	A0A091HMF0	A0A091IKC0	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-10; Belongs to the G-protein coupled receptor Fz/Smo family.	0.819
N300_00639	N300_10709	A0A091HMF0	A0A091HQ41	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-3; Belongs to the G-protein coupled receptor Fz/Smo family.	0.872
N300_00639	N300_11234	A0A091HMF0	A0A091I3M4	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-2; Belongs to the G-protein coupled receptor Fz/Smo family.	0.878
N300_00639	N300_13618	A0A091HMF0	A0A091JA03	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	Frizzled-8; Belongs to the G-protein coupled receptor Fz/Smo family.	0.834
N300_00957	N300_00639	A0A091IN43	A0A091HMF0	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase transmembrane receptor ROR1; Belongs to the protein kinase superfamily. Tyr protein kinase family.	0.826
N300_00957	N300_01734	A0A091IN43	A0A091IFB1	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-4; Belongs to the G-protein coupled receptor Fz/Smo family.	0.517
N300_00957	N300_01906	A0A091IN43	A0A091HR36	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Tyrosine-protein kinase RYK.	0.812
N300_00957	N300_02629	A0A091IN43	A0A091IKC9	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Low-density lipoprotein receptor-related protein 6.	0.847
N300_00957	N300_03906	A0A091IN43	A0A091IGF8	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-6; Belongs to the G-protein coupled receptor Fz/Smo family.	0.573
N300_00957	N300_06297	A0A091IN43	A0A091I575	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Low-density lipoprotein receptor-related protein 5.	0.845
N300_00957	N300_06690	A0A091IN43	A0A091I2S5	Frizzled-1; Belongs to the G-protein coupled receptor Fz/Smo family.	Frizzled-5; Belongs to the G-protein coupled receptor Fz/Smo family.	0.411