7 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_08040	E3 ubiquitin-protein ligase TRIM32. (649 aa)
	N300_02089	La-related protein 7. (570 aa)
	N300_02049	MyoD family inhibitor domain-containing protein. (220 aa)
	N300_09082	Remodeling and spacing factor 1. (1329 aa)
	N300_02669	ATP-dependent RNA helicase A. (855 aa)
	N300_02670	ATP-dependent RNA helicase A. (372 aa)
	N300_12482	Putative E3 ubiquitin-protein ligase TRIM8. (551 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_02089	N300_02669	A0A091I844	A0A091I2E0	La-related protein 7.	ATP-dependent RNA helicase A.	0.415
N300_02089	N300_02670	A0A091I844	A0A091HZA7	La-related protein 7.	ATP-dependent RNA helicase A.	0.415
N300_02669	N300_02089	A0A091I2E0	A0A091I844	ATP-dependent RNA helicase A.	La-related protein 7.	0.415
N300_02669	N300_02670	A0A091I2E0	A0A091HZA7	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02670	N300_02089	A0A091HZA7	A0A091I844	ATP-dependent RNA helicase A.	La-related protein 7.	0.415
N300_02670	N300_02669	A0A091HZA7	A0A091I2E0	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_08040	N300_12482	A0A091ICA4	A0A091HPS3	E3 ubiquitin-protein ligase TRIM32.	Putative E3 ubiquitin-protein ligase TRIM8.	0.474
N300_12482	N300_08040	A0A091HPS3	A0A091ICA4	Putative E3 ubiquitin-protein ligase TRIM8.	E3 ubiquitin-protein ligase TRIM32.	0.474