69 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_14833	Serine/arginine repetitive matrix protein 4. (612 aa)
	N300_10741	RNA-binding protein 25. (831 aa)
	N300_01247	Histone deacetylase complex subunit SAP18. (92 aa)
	N300_15167	Muscleblind-like 3. (371 aa)
	N300_02482	DAZ-associated protein 1. (398 aa)
	N300_15744	RNA-binding protein 38. (159 aa)
	N300_05004	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (591 aa)
	N300_01052	Transformer-2 protein alpha. (258 aa)
	N300_14933	RE1-silencing transcription factor. (890 aa)
	N300_04744	RNA-binding motif protein, X chromosome. (388 aa)
	N300_06846	RNA binding protein fox-1 1. (390 aa)
	N300_05867	Serine/arginine repetitive matrix protein 1. (938 aa)
	N300_08212	Splicing factor, suppressor of white-apricot. (927 aa)
	N300_13893	Pre-mRNA-processing factor 19. (477 aa)
	N300_07218	Uncharacterized protein. (202 aa)
	N300_12793	Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6. (371 aa)
	N300_12791	Serine/arginine-rich splicing factor 2. (219 aa)
	N300_05163	YTH domain-containing protein 1. (687 aa)
	N300_03805	Serine/arginine-rich splicing factor 3. (164 aa)
	N300_02526	CUGBP Elav-like family member 5. (400 aa)
	N300_11854	Muscleblind-like 1. (367 aa)
	N300_10013	RNA-binding protein 5. (770 aa)
	N300_01382	RNA-binding protein 7. (230 aa)
	N300_10917	Splicing factor 3B subunit 4. (244 aa)
	N300_03673	Putative RNA-binding protein 15. (570 aa)
	N300_14549	CUGBP Elav-like family member 4. (361 aa)
	N300_02504	Polypyrimidine tract-binding protein 1. (491 aa)
	N300_02489	Cold-inducible RNA-binding protein. (166 aa)
	N300_09962	Putative RNA-binding protein 15B. (557 aa)
	N300_02869	Splicing factor 1. (139 aa)
	N300_04000	CUGBP Elav-like family member 3. (354 aa)
	N300_11545	Putative ATP-dependent RNA helicase DDX17; Belongs to the DEAD box helicase family. (482 aa)
	N300_04001	CUGBP Elav-like family member 4. (95 aa)
	N300_05372	Serine/arginine-rich splicing factor 7. (231 aa)
	N300_07016	Centrosomal protein CEP57L1. (450 aa)
	N300_10913	RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs. (174 aa)
	N300_03248	Fragile X mental retardation syndrome-related protein 1. (660 aa)
	N300_08435	KH domain-containing, RNA-binding, signal transduction-associated protein 3. (316 aa)
	N300_05364	Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family. (350 aa)
	N300_05369	Serine/arginine-rich splicing factor 7. (241 aa)
	N300_00641	Ribonucleoprotein PTB-binding 2. (606 aa)
	N300_14756	Uncharacterized protein. (124 aa)
	N300_06510	Myogenic factor. (298 aa)
	N300_04624	RNA-binding protein 20. (789 aa)
	N300_05412	Protein quaking. (280 aa)
	N300_10120	Pre-mRNA-splicing regulator WTAP. (368 aa)
	N300_03328	RNA-binding protein 39. (522 aa)
	N300_06243	Muscleblind-like 2. (366 aa)
	N300_09238	Heterogeneous nuclear ribonucleoprotein K. (462 aa)
	N300_04623	RNA-binding protein 20. (151 aa)
	N300_08345	Poly(U)-binding-splicing factor PUF60. (522 aa)
	N300_13708	Protein FAM172A. (416 aa)
	N300_00508	CUGBP Elav-like family member 2. (494 aa)
	N300_13360	Nucleolin. (640 aa)
	N300_15444	KH domain-containing, RNA-binding, signal transduction-associated protein 1. (330 aa)
	N300_15483	Thyroid hormone receptor-associated protein 3. (973 aa)
	N300_00929	KH domain-containing, RNA-binding, signal transduction-associated protein 2. (318 aa)
	N300_02207	Putative RNA-binding protein 23. (233 aa)
	N300_02024	RNA-binding protein Nova-1. (416 aa)
	N300_03519	Nuclear speckle splicing regulatory protein 1. (541 aa)
	N300_12736	WD40 repeat-containing protein SMU1. (505 aa)
	N300_05081	RNA binding protein fox-1 3. (349 aa)
	N300_12694	Polypyrimidine tract-binding protein 3. (500 aa)
	N300_07296	Protein SON. (460 aa)
	N300_08597	RNA binding protein fox-1 2. (301 aa)
	N300_14550	CUGBP Elav-like family member 4. (128 aa)
	N300_12568	CUGBP Elav-like family member 1. (515 aa)
	N300_02089	La-related protein 7. (570 aa)
	N300_09958	RNA-binding protein 6. (1101 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00508	N300_06243	A0A091HWN0	A0A091HQK8	CUGBP Elav-like family member 2.	Muscleblind-like 2.	0.532
N300_00508	N300_11854	A0A091HWN0	A0A091IC31	CUGBP Elav-like family member 2.	Muscleblind-like 1.	0.559
N300_00508	N300_14549	A0A091HWN0	A0A091I9Z0	CUGBP Elav-like family member 2.	CUGBP Elav-like family member 4.	0.448
N300_00508	N300_15167	A0A091HWN0	A0A091J568	CUGBP Elav-like family member 2.	Muscleblind-like 3.	0.533
N300_00641	N300_01052	A0A091HM73	A0A091IND2	Ribonucleoprotein PTB-binding 2.	Transformer-2 protein alpha.	0.435
N300_00641	N300_02489	A0A091HM73	A0A091I9W9	Ribonucleoprotein PTB-binding 2.	Cold-inducible RNA-binding protein.	0.421
N300_00641	N300_02504	A0A091HM73	A0A091I9X6	Ribonucleoprotein PTB-binding 2.	Polypyrimidine tract-binding protein 1.	0.517
N300_00641	N300_03805	A0A091HM73	A0A091ID09	Ribonucleoprotein PTB-binding 2.	Serine/arginine-rich splicing factor 3.	0.420
N300_00641	N300_04744	A0A091HM73	A0A091IM91	Ribonucleoprotein PTB-binding 2.	RNA-binding motif protein, X chromosome.	0.426
N300_00641	N300_08597	A0A091HM73	A0A091I6N7	Ribonucleoprotein PTB-binding 2.	RNA binding protein fox-1 2.	0.416
N300_00641	N300_09238	A0A091HM73	A0A091HR85	Ribonucleoprotein PTB-binding 2.	Heterogeneous nuclear ribonucleoprotein K.	0.602
N300_00641	N300_09958	A0A091HM73	A0A091I8C0	Ribonucleoprotein PTB-binding 2.	RNA-binding protein 6.	0.404
N300_00641	N300_10013	A0A091HM73	A0A091IBS9	Ribonucleoprotein PTB-binding 2.	RNA-binding protein 5.	0.404
N300_00641	N300_12694	A0A091HM73	A0A091I4N2	Ribonucleoprotein PTB-binding 2.	Polypyrimidine tract-binding protein 3.	0.517
N300_00641	N300_12791	A0A091HM73	A0A091ID92	Ribonucleoprotein PTB-binding 2.	Serine/arginine-rich splicing factor 2.	0.504
N300_00641	N300_13360	A0A091HM73	A0A091HX60	Ribonucleoprotein PTB-binding 2.	Nucleolin.	0.491
N300_00929	N300_02489	A0A091HZ56	A0A091I9W9	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	Cold-inducible RNA-binding protein.	0.406
N300_00929	N300_02504	A0A091HZ56	A0A091I9X6	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	Polypyrimidine tract-binding protein 1.	0.427
N300_00929	N300_04744	A0A091HZ56	A0A091IM91	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	RNA-binding motif protein, X chromosome.	0.474
N300_00929	N300_06846	A0A091HZ56	A0A091IKT3	KH domain-containing, RNA-binding, signal transduction-associated protein 2.	RNA binding protein fox-1 1.	0.456