(16 nodes) Lung morphogenesis network (Calypte anna)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_05546	Pro-cathepsin H; Belongs to the peptidase C1 family. (216 aa)
	N300_12501	Fibroblast growth factor; Belongs to the heparin-binding growth factors family. (203 aa)
	N300_15485	Serine/threonine-protein kinase 40. (437 aa)
	N300_09727	Transcription factor 21. (170 aa)
	N300_05040	Transcription factor Sox-9. (417 aa)
	N300_01502	Catenin beta-1. (777 aa)
	N300_15730	Cathepsin Z; Belongs to the peptidase C1 family. (260 aa)
	N300_09950	Dystroglycan. (897 aa)
	N300_05142	Protein transport protein Sec24B. (1186 aa)
	N300_12532	Hermansky-Pudlak syndrome 1 protein. (677 aa)
	N300_03049	Hedgehog-interacting protein. (609 aa)
	N300_03833	Epithelial splicing regulatory protein 2. (698 aa)
	N300_14359	Leukemia inhibitory factor. (150 aa)
	N300_07601	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily. (491 aa)
	N300_04865	Noggin. (216 aa)
	N300_05153	Pituitary homeobox 2. (257 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_01502	N300_05040	A0A091HZ16	A0A091HYX8	Catenin beta-1.	Transcription factor Sox-9.	0.732
N300_01502	N300_05153	A0A091HZ16	A0A091J0D4	Catenin beta-1.	Pituitary homeobox 2.	0.439
N300_01502	N300_07601	A0A091HZ16	A0A091IK18	Catenin beta-1.	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	0.562
N300_05040	N300_01502	A0A091HYX8	A0A091HZ16	Transcription factor Sox-9.	Catenin beta-1.	0.732
N300_05153	N300_01502	A0A091J0D4	A0A091HZ16	Pituitary homeobox 2.	Catenin beta-1.	0.439
N300_05546	N300_15730	A0A091II95	A0A091I9A9	Pro-cathepsin H; Belongs to the peptidase C1 family.	Cathepsin Z; Belongs to the peptidase C1 family.	0.855
N300_07601	N300_01502	A0A091IK18	A0A091HZ16	Serine/threonine-protein kinase receptor; Belongs to the protein kinase superfamily. TKL Ser/Thr protein kinase family. TGFB receptor subfamily.	Catenin beta-1.	0.562
N300_15730	N300_05546	A0A091I9A9	A0A091II95	Cathepsin Z; Belongs to the peptidase C1 family.	Pro-cathepsin H; Belongs to the peptidase C1 family.	0.855