STRINGSTRING
N300_10103 N300_10103 N300_15343 N300_15343 N300_05415 N300_05415 N300_06106 N300_06106 N300_12612 N300_12612 N300_03373 N300_03373 N300_15246 N300_15246 N300_15052 N300_15052 N300_02670 N300_02670 N300_05430 N300_05430 N300_02669 N300_02669 N300_12748 N300_12748 N300_01540 N300_01540 N300_10584 N300_10584 N300_02426 N300_02426 N300_12564 N300_12564 N300_08040 N300_08040 N300_04075 N300_04075 N300_02958 N300_02958 N300_15087 N300_15087 N300_03652 N300_03652 PAFAH1B1 PAFAH1B1 N300_12856 N300_12856 N300_08251 N300_08251
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N300_10103Interferon-induced helicase C domain-containing protein 1. (971 aa)
N300_15343Disintegrin and metalloproteinase domain-containing protein 17. (797 aa)
N300_05415E3 ubiquitin-protein ligase parkin. (234 aa)
N300_06106Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. (1571 aa)
N300_12612Receptor-interacting serine/threonine-protein kinase 1. (666 aa)
N300_03373Protein LSM14 A. (454 aa)
N300_15246Mitochondrial antiviral-signaling protein. (633 aa)
N300_15052Receptor-interacting serine/threonine-protein kinase 2. (514 aa)
N300_02670ATP-dependent RNA helicase A. (372 aa)
N300_05430Poly [ADP-ribose] polymerase. (204 aa)
N300_02669ATP-dependent RNA helicase A. (855 aa)
N300_12748Putative ATP-dependent RNA helicase DDX58. (833 aa)
N300_01540Endothelin-1. (162 aa)
N300_10584HLA class II histocompatibility antigen gamma chain. (222 aa)
N300_02426Protein FADD. (179 aa)
N300_12564Complement C1q tumor necrosis factor-related protein 4. (333 aa)
N300_08040E3 ubiquitin-protein ligase TRIM32. (649 aa)
N300_04075Ubiquitin-conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family. (182 aa)
N300_02958Interleukin-7. (130 aa)
N300_15087Growth arrest-specific protein 6. (643 aa)
N300_03652Poly [ADP-ribose] polymerase 9. (764 aa)
PAFAH1B1Lissencephaly-1 homolog; Positively regulates the activity of the minus-end directed microtubule motor protein dynein. May enhance dynein-mediated microtubule sliding by targeting dynein to the microtubule plus end. Required for several dynein- and microtubule-dependent processes such as the maintenance of Golgi integrity, the peripheral transport of microtubule fragments and the coupling of the nucleus and centrosome. May be required for proliferation of neuronal precursors and neuronal migration; Belongs to the WD repeat LIS1/nudF family. (410 aa)
N300_12856Inhibitor of nuclear factor kappa-B kinase subunit epsilon. (561 aa)
N300_08251E3 ubiquitin-protein ligase RNF185. (194 aa)
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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