10 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_02669	ATP-dependent RNA helicase A. (855 aa)
	N300_02670	ATP-dependent RNA helicase A. (372 aa)
	N300_01045	Interleukin-6. (152 aa)
	N300_01512	LIM domain-containing protein 1. (247 aa)
	N300_12612	Receptor-interacting serine/threonine-protein kinase 1. (666 aa)
	N300_04601	Putative tRNA pseudouridine synthase 1. (210 aa)
	N300_15299	Pumilio 2. (1046 aa)
	N300_05004	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family. (591 aa)
	N300_03377	Wilms tumor protein 1-interacting protein. (212 aa)
	N300_10840	Pumilio 1. (1043 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_02669	N300_02670	A0A091I2E0	A0A091HZA7	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02669	N300_05004	A0A091I2E0	A0A091IP70	ATP-dependent RNA helicase A.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.869
N300_02669	N300_12612	A0A091I2E0	A0A091HUH5	ATP-dependent RNA helicase A.	Receptor-interacting serine/threonine-protein kinase 1.	0.435
N300_02670	N300_02669	A0A091HZA7	A0A091I2E0	ATP-dependent RNA helicase A.	ATP-dependent RNA helicase A.	0.937
N300_02670	N300_05004	A0A091HZA7	A0A091IP70	ATP-dependent RNA helicase A.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.869
N300_02670	N300_12612	A0A091HZA7	A0A091HUH5	ATP-dependent RNA helicase A.	Receptor-interacting serine/threonine-protein kinase 1.	0.435
N300_04601	N300_05004	A0A091HP48	A0A091IP70	Putative tRNA pseudouridine synthase 1.	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	0.619
N300_05004	N300_02669	A0A091IP70	A0A091I2E0	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase A.	0.869
N300_05004	N300_02670	A0A091IP70	A0A091HZA7	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase A.	0.869
N300_05004	N300_04601	A0A091IP70	A0A091HP48	Putative ATP-dependent RNA helicase DDX5; Belongs to the DEAD box helicase family.	Putative tRNA pseudouridine synthase 1.	0.619
N300_12612	N300_02669	A0A091HUH5	A0A091I2E0	Receptor-interacting serine/threonine-protein kinase 1.	ATP-dependent RNA helicase A.	0.435
N300_12612	N300_02670	A0A091HUH5	A0A091HZA7	Receptor-interacting serine/threonine-protein kinase 1.	ATP-dependent RNA helicase A.	0.435