26 items (Calypte anna) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	N300_04577	Low-density lipoprotein receptor-related protein 2. (4627 aa)
	N300_01951	Low-density lipoprotein receptor class A domain-containing protein 3. (332 aa)
	N300_00613	Complement component C8 beta chain. (577 aa)
	N300_07426	Complement component C7. (832 aa)
	N300_07427	Complement component C6. (934 aa)
	N300_14945	Low-density lipoprotein receptor-related protein 2. (665 aa)
	N300_14987	Relaxin receptor 1. (751 aa)
	N300_06297	Low-density lipoprotein receptor-related protein 5. (1540 aa)
	N300_09665	Low-density lipoprotein receptor-related protein 11. (297 aa)
	N300_07179	Suppressor of tumorigenicity 14 protein. (831 aa)
	N300_11128	Transmembrane protease serine 3; Belongs to the peptidase S1 family. (455 aa)
	N300_05260	Neuropilin and tolloid-like 1. (526 aa)
	N300_03872	Neuropilin and tolloid-like 2. (429 aa)
	N300_03366	Low-density lipoprotein receptor-related protein 3. (748 aa)
	N300_04103	Atrial natriuretic peptide-converting enzyme. (1026 aa)
	N300_04356	Very low-density lipoprotein receptor. (827 aa)
	N300_03913	Low-density lipoprotein receptor-related protein 12. (843 aa)
	N300_02629	Low-density lipoprotein receptor-related protein 6. (1594 aa)
	N300_11121	Transmembrane protease serine 2; Belongs to the peptidase S1 family. (486 aa)
	N300_05146	Complement factor I. (477 aa)
	N300_08849	Kunitz-type protease inhibitor 1. (508 aa)
	N300_09896	Relaxin receptor 1. (665 aa)
	N300_08161	Integral membrane protein DGCR2/IDD. (515 aa)
	N300_00612	Complement component C8 alpha chain. (559 aa)
	N300_04023	Low-density lipoprotein receptor-related protein 8. (805 aa)
	N300_09681	Sortilin-related receptor. (2109 aa)

Your Current Organism:

Calypte anna

NCBI taxonomy Id: 9244
Other names: C. anna

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
N300_00612	N300_00613	A0A091HJ09	A0A091HM45	Complement component C8 alpha chain.	Complement component C8 beta chain.	0.923
N300_00612	N300_01951	A0A091HJ09	A0A091HLR6	Complement component C8 alpha chain.	Low-density lipoprotein receptor class A domain-containing protein 3.	0.407
N300_00612	N300_04023	A0A091HJ09	A0A091HJI7	Complement component C8 alpha chain.	Low-density lipoprotein receptor-related protein 8.	0.419
N300_00612	N300_04356	A0A091HJ09	A0A091II34	Complement component C8 alpha chain.	Very low-density lipoprotein receptor.	0.419
N300_00612	N300_07426	A0A091HJ09	A0A091HWA3	Complement component C8 alpha chain.	Complement component C7.	0.723
N300_00612	N300_07427	A0A091HJ09	A0A091HZI6	Complement component C8 alpha chain.	Complement component C6.	0.967
N300_00613	N300_00612	A0A091HM45	A0A091HJ09	Complement component C8 beta chain.	Complement component C8 alpha chain.	0.923
N300_00613	N300_01951	A0A091HM45	A0A091HLR6	Complement component C8 beta chain.	Low-density lipoprotein receptor class A domain-containing protein 3.	0.584
N300_00613	N300_02629	A0A091HM45	A0A091IKC9	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 6.	0.584
N300_00613	N300_03366	A0A091HM45	A0A091IHH7	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 3.	0.584
N300_00613	N300_03913	A0A091HM45	A0A091IK04	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 12.	0.584
N300_00613	N300_04023	A0A091HM45	A0A091HJI7	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 8.	0.584
N300_00613	N300_04356	A0A091HM45	A0A091II34	Complement component C8 beta chain.	Very low-density lipoprotein receptor.	0.584
N300_00613	N300_04577	A0A091HM45	A0A091HLC5	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 2.	0.584
N300_00613	N300_06297	A0A091HM45	A0A091I575	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 5.	0.584
N300_00613	N300_07426	A0A091HM45	A0A091HWA3	Complement component C8 beta chain.	Complement component C7.	0.916
N300_00613	N300_07427	A0A091HM45	A0A091HZI6	Complement component C8 beta chain.	Complement component C6.	0.961
N300_00613	N300_08161	A0A091HM45	A0A091J7K7	Complement component C8 beta chain.	Integral membrane protein DGCR2/IDD.	0.584
N300_00613	N300_09681	A0A091HM45	A0A091HJT6	Complement component C8 beta chain.	Sortilin-related receptor.	0.585
N300_00613	N300_14945	A0A091HM45	A0A091I094	Complement component C8 beta chain.	Low-density lipoprotein receptor-related protein 2.	0.584