STRINGSTRING
N300_05220 N300_05220 N300_10579 N300_10579 N300_04010 N300_04010 N300_04572 N300_04572 N300_10923 N300_10923 LSM5 LSM5 N300_06826 N300_06826 N300_10741 N300_10741 N300_05863 N300_05863 N300_13692 N300_13692 N300_15362 N300_15362 N300_01698 N300_01698 N300_11297 N300_11297 N300_13068 N300_13068 N300_11472 N300_11472 N300_05469 N300_05469 N300_01052 N300_01052 N300_04749 N300_04749 N300_04744 N300_04744 N300_05927 N300_05927 N300_08700 N300_08700 N300_04306 N300_04306 N300_04298 N300_04298 N300_12604 N300_12604 N300_02315 N300_02315 N300_01283 N300_01283 N300_15187 N300_15187 N300_07217 N300_07217 N300_05877 N300_05877 N300_05867 N300_05867 N300_09298 N300_09298 N300_08180 N300_08180 N300_11990 N300_11990 N300_13454 N300_13454 N300_15896 N300_15896 LSM4 LSM4 N300_07776 N300_07776 N300_13893 N300_13893 N300_10458 N300_10458 N300_02014 N300_02014 N300_03056 N300_03056 N300_02187 N300_02187 N300_07756 N300_07756 N300_11360 N300_11360 N300_03752 N300_03752 N300_15126 N300_15126 N300_10013 N300_10013 N300_09050 N300_09050 N300_01382 N300_01382 N300_11670 N300_11670 N300_02988 N300_02988 N300_02489 N300_02489 N300_10011 N300_10011 N300_15615 N300_15615 N300_02869 N300_02869 N300_00687 N300_00687 N300_11461 N300_11461 N300_13180 N300_13180 N300_09958 N300_09958 N300_09672 N300_09672 N300_11669 N300_11669 N300_07308 N300_07308 N300_07946 N300_07946 N300_07693 N300_07693 N300_12694 N300_12694 N300_05459 N300_05459 N300_10850 N300_10850 N300_10834 N300_10834 N300_01135 N300_01135 N300_03455 N300_03455 N300_02669 N300_02669 N300_06705 N300_06705 N300_04884 N300_04884 N300_12736 N300_12736 N300_03519 N300_03519 N300_14965 N300_14965 N300_03461 N300_03461 N300_08710 N300_08710 N300_02670 N300_02670 N300_00486 N300_00486 N300_07127 N300_07127 LSM8 LSM8 N300_10497 N300_10497 N300_10136 N300_10136 N300_07412 N300_07412 N300_00519 N300_00519 N300_04680 N300_04680 N300_08742 N300_08742 N300_08709 N300_08709 N300_02977 N300_02977 N300_08080 N300_08080 N300_15492 N300_15492 N300_06667 N300_06667 N300_00900 N300_00900 N300_10380 N300_10380 N300_10375 N300_10375 N300_14245 N300_14245 N300_08345 N300_08345 N300_07086 N300_07086 N300_03364 N300_03364 N300_03294 N300_03294 N300_02764 N300_02764 N300_01423 N300_01423 N300_01933 N300_01933 N300_06220 N300_06220 N300_06099 N300_06099 N300_08898 N300_08898 N300_10374 N300_10374 N300_11081 N300_11081 N300_04627 N300_04627 N300_03265 N300_03265 N300_12508 N300_12508 N300_05677 N300_05677 N300_12390 N300_12390 N300_12093 N300_12093 N300_06992 N300_06992 N300_04022 N300_04022 N300_06193 N300_06193 N300_08950 N300_08950 N300_04496 N300_04496 N300_13177 N300_13177 N300_13152 N300_13152 N300_13112 N300_13112 N300_05615 N300_05615 N300_03034 N300_03034 N300_10347 N300_10347 LSM3 LSM3 N300_08648 N300_08648
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N300_05220Proline-rich protein PRCC. (318 aa)
N300_10579Pre-mRNA-splicing factor RBM22. (402 aa)
N300_04010Pre-mRNA-splicing factor 38A. (312 aa)
N300_04572Peptidyl-prolyl cis-trans isomerase G. (750 aa)
N300_10923U4/U6 small nuclear ribonucleoprotein Prp3. (684 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (67 aa)
N300_06826Putative RNA-binding protein Luc7-like 1. (350 aa)
N300_10741RNA-binding protein 25. (831 aa)
N300_05863Pre-mRNA-splicing factor syf2. (199 aa)
N300_13692Heterogeneous nuclear ribonucleoprotein K. (442 aa)
N300_15362RNA-binding protein Raly. (249 aa)
N300_01698Spliceosome-associated protein CWC15. (230 aa)
N300_11297RNA-binding motif protein, X-linked 2. (118 aa)
N300_13068Pre-mRNA-splicing factor SLU7. (581 aa)
N300_11472WD repeat-containing protein 25. (327 aa)
N300_05469U4/U6.U5 tri-snRNP-associated protein 2. (421 aa)
N300_01052Transformer-2 protein alpha. (258 aa)
N300_04749HIV Tat-specific factor 1. (394 aa)
N300_04744RNA-binding motif protein, X chromosome. (388 aa)
N300_05927Tumor protein p63-regulated gene 1-like. (205 aa)
N300_08700Calcium homeostasis endoplasmic reticulum protein. (904 aa)
N300_04306Splicing regulatory glutamine/lysine-rich protein 1. (492 aa)
N300_04298Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (581 aa)
N300_12604Serine/threonine-protein kinase PRP4. (992 aa)
N300_02315WW domain-binding protein 4. (396 aa)
N300_01283CWF19-like 2. (162 aa)
N300_15187Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N300_07217Putative ATP-dependent RNA helicase DHX33. (614 aa)
N300_05877Splicing factor 3A subunit 3. (457 aa)
N300_05867Serine/arginine repetitive matrix protein 1. (938 aa)
N300_09298Uncharacterized protein C9orf78. (262 aa)
N300_08180Peptidyl-prolyl cis-trans isomerase-like 2. (510 aa)
N300_11990Pre-mRNA-processing factor 40 A. (879 aa)
N300_13454Protein SDE2. (194 aa)
N300_15896WD repeat-containing protein 53. (353 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
N300_07776SURP and G-patch domain-containing protein 2. (1083 aa)
N300_13893Pre-mRNA-processing factor 19. (477 aa)
N300_10458Pre-mRNA-splicing factor SPF27. (164 aa)
N300_02014Ubiquitin-like 5. (73 aa)
N300_03056U6 snRNA-associated Sm-like LSm6. (80 aa)
N300_02187Cell division cycle 5-like. (803 aa)
N300_07756Protein FAM32A. (111 aa)
N300_11360U2 small nuclear ribonucleoprotein B. (226 aa)
N300_03752U1 small nuclear ribonucleoprotein C. (157 aa)
N300_15126Zinc finger matrin-type protein 2. (193 aa)
N300_10013RNA-binding protein 5. (770 aa)
N300_09050Protein BUD31. (113 aa)
N300_01382RNA-binding protein 7. (230 aa)
N300_11670Uncharacterized protein. (111 aa)
N300_02988Microfibrillar-associated protein 1. (421 aa)
N300_02489Cold-inducible RNA-binding protein. (166 aa)
N300_10011Poly(RC)-binding protein 4. (278 aa)
N300_15615Beta-catenin-like 1. (562 aa)
N300_02869Splicing factor 1. (139 aa)
N300_00687SURP and G-patch domain-containing protein 1. (616 aa)
N300_11461Putative ATP-dependent RNA helicase DHX34. (1091 aa)
N300_13180PHD finger-like domain-containing protein 5A. (93 aa)
N300_09958RNA-binding protein 6. (1101 aa)
N300_09672Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (457 aa)
N300_11669Splicing factor 3A subunit 2. (205 aa)
N300_07308PAX3-and PAX7-binding protein 1. (807 aa)
N300_07946Serine/threonine-protein phosphatase 1 regulatory subunit 10. (464 aa)
N300_07693Heterogeneous nuclear ribonucleoprotein H3. (334 aa)
N300_12694Polypyrimidine tract-binding protein 3. (500 aa)
N300_05459U5 small nuclear ribonucleoprotein 200 kDa helicase. (185 aa)
N300_10850DnaJ subfamily C member 8. (228 aa)
N300_10834Serine/arginine-rich splicing factor 4. (446 aa)
N300_01135Heterogeneous nuclear ribonucleoprotein Q. (426 aa)
N300_03455Uroplakin-3b. (210 aa)
N300_02669ATP-dependent RNA helicase A. (855 aa)
N300_06705Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
N300_04884Luc7-like 3. (431 aa)
N300_12736WD40 repeat-containing protein SMU1. (505 aa)
N300_03519Nuclear speckle splicing regulatory protein 1. (541 aa)
N300_14965Pleiotropic regulator 1. (513 aa)
N300_03461PRKR-interacting protein 1. (148 aa)
N300_08710Heterogeneous nuclear ribonucleoprotein M. (670 aa)
N300_02670ATP-dependent RNA helicase A. (372 aa)
N300_00486Pre-mRNA-splicing factor 18. (320 aa)
N300_07127NK-tumor recognition protein. (1458 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (88 aa)
N300_10497Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (153 aa)
N300_10136Dynein assembly factor with WDR repeat domains 1. (410 aa)
N300_07412WD repeat-containing protein 70. (616 aa)
N300_00519Splicing factor 45. (401 aa)
N300_04680NKAP-like. (279 aa)
N300_08742U6 snRNA-associated Sm-like LSm7. (101 aa)
N300_08709Coiled-coil domain-containing protein 94. (181 aa)
N300_02977RNA-binding Raly-like. (205 aa)
N300_08080U2 small nuclear ribonucleoprotein A. (228 aa)
N300_15492Smad nuclear-interacting protein 1. (237 aa)
N300_06667Small nuclear ribonucleoprotein F. (65 aa)
N300_00900Polypyrimidine tract-binding protein 2. (519 aa)
N300_10380Pre-mRNA branch site protein p14. (115 aa)
N300_10375GC-rich sequence DNA-binding factor 2. (170 aa)
N300_14245Nuclease-sensitive element-binding protein 1. (215 aa)
N300_08345Poly(U)-binding-splicing factor PUF60. (522 aa)
N300_07086Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (758 aa)
N300_03364G patch domain-containing protein 1. (950 aa)
N300_03294Serine/arginine-rich splicing factor 6. (265 aa)
N300_02764Poly(RC)-binding protein 3. (306 aa)
N300_01423Nuclease-sensitive element-binding protein 1. (269 aa)
N300_01933U2 snRNP-associated SURP motif-containing protein. (973 aa)
N300_06220RING finger protein 113A. (307 aa)
N300_06099Pre-mRNA-splicing factor CWC25. (405 aa)
N300_08898Calcium-regulated heat stable protein 1. (152 aa)
N300_10374GC-rich sequence DNA-binding factor 2. (566 aa)
N300_11081Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (625 aa)
N300_04627Survival of motor neuron-related-splicing factor 30. (240 aa)
N300_03265Putative ATP-dependent RNA helicase DHX35. (695 aa)
N300_12508Uncharacterized protein. (87 aa)
N300_05677Pinin. (687 aa)
N300_12390Poly(RC)-binding protein 3. (297 aa)
N300_12093Splicing factor U2AF 35 kDa subunit. (178 aa)
N300_06992Protein lin-28 B. (249 aa)
N300_04022Protein mago nashi 2. (146 aa)
N300_06193ATP-dependent RNA helicase DHX8. (598 aa)
N300_08950Heterogeneous nuclear ribonucleoprotein A/B. (263 aa)
N300_04496Pre-mRNA-splicing factor CWC22. (870 aa)
N300_13177Cold shock domain-containing protein C2. (162 aa)
N300_13152Putative RNA-binding protein Luc7-like 2. (378 aa)
N300_13112WW domain-binding protein 11. (651 aa)
N300_05615RRM domain-containing protein. (71 aa)
N300_03034Heterogeneous nuclear ribonucleoprotein L-like. (429 aa)
N300_10347Tuftelin-interacting protein 11. (760 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
N300_08648PCNA-interacting partner. (572 aa)
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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