STRINGSTRING
N300_06667 N300_06667 N300_01910 N300_01910 N300_00900 N300_00900 N300_10380 N300_10380 N300_10375 N300_10375 N300_14245 N300_14245 N300_02812 N300_02812 N300_08345 N300_08345 N300_07086 N300_07086 N300_03364 N300_03364 N300_03294 N300_03294 N300_02764 N300_02764 N300_01423 N300_01423 N300_01933 N300_01933 N300_06220 N300_06220 N300_06099 N300_06099 N300_08898 N300_08898 N300_10374 N300_10374 N300_11081 N300_11081 N300_04627 N300_04627 N300_03265 N300_03265 N300_12508 N300_12508 N300_09472 N300_09472 N300_12123 N300_12123 N300_05677 N300_05677 N300_12390 N300_12390 N300_12093 N300_12093 N300_06992 N300_06992 N300_04022 N300_04022 N300_06193 N300_06193 N300_08950 N300_08950 N300_04496 N300_04496 N300_05369 N300_05369 N300_13177 N300_13177 N300_13152 N300_13152 N300_13112 N300_13112 N300_05615 N300_05615 N300_10923 N300_10923 N300_04572 N300_04572 N300_05372 N300_05372 N300_04010 N300_04010 N300_10579 N300_10579 LSM3 LSM3 N300_11534 N300_11534 N300_10347 N300_10347 N300_10243 N300_10243 N300_03034 N300_03034 N300_06315 N300_06315 N300_03455 N300_03455 N300_03457 N300_03457 N300_01135 N300_01135 N300_10834 N300_10834 N300_10850 N300_10850 N300_05459 N300_05459 N300_12694 N300_12694 N300_12742 N300_12742 N300_13425 N300_13425 N300_07693 N300_07693 N300_07946 N300_07946 N300_07308 N300_07308 N300_15596 N300_15596 N300_11669 N300_11669 N300_09672 N300_09672 N300_15502 N300_15502 N300_09958 N300_09958 N300_13180 N300_13180 N300_11461 N300_11461 N300_00687 N300_00687 N300_02869 N300_02869 N300_15615 N300_15615 N300_10011 N300_10011 N300_02489 N300_02489 N300_02988 N300_02988 N300_10917 N300_10917 N300_03734 N300_03734 N300_11670 N300_11670 N300_09423 N300_09423 N300_01382 N300_01382 N300_09050 N300_09050 N300_10013 N300_10013 N300_15126 N300_15126 N300_02494 N300_02494 N300_03752 N300_03752 N300_11360 N300_11360 N300_07756 N300_07756 N300_12791 N300_12791 N300_02187 N300_02187 N300_03056 N300_03056 N300_14354 N300_14354 N300_02014 N300_02014 N300_10458 N300_10458 N300_13893 N300_13893 N300_07776 N300_07776 LSM4 LSM4 N300_15273 N300_15273 N300_15896 N300_15896 N300_13454 N300_13454 N300_11990 N300_11990 N300_08180 N300_08180 N300_09298 N300_09298 N300_03888 N300_03888 N300_15230 N300_15230 N300_05867 N300_05867 N300_05877 N300_05877 N300_07217 N300_07217 N300_15187 N300_15187 N300_01283 N300_01283 N300_02315 N300_02315 N300_12604 N300_12604 N300_10538 N300_10538 N300_04298 N300_04298 N300_01514 N300_01514 N300_04306 N300_04306 N300_08700 N300_08700 N300_05927 N300_05927 N300_04744 N300_04744 N300_04749 N300_04749 N300_01052 N300_01052 N300_02373 N300_02373 N300_03468 N300_03468 N300_05469 N300_05469 N300_08100 N300_08100 N300_11472 N300_11472 N300_15673 N300_15673 N300_13068 N300_13068 N300_15583 N300_15583 N300_11297 N300_11297 N300_01698 N300_01698 N300_15362 N300_15362 N300_13692 N300_13692 N300_05863 N300_05863 N300_08229 N300_08229 N300_10741 N300_10741 N300_06826 N300_06826 LSM5 LSM5 N300_02669 N300_02669 N300_06705 N300_06705 N300_04884 N300_04884 N300_05220 N300_05220 N300_08648 N300_08648 N300_12736 N300_12736 N300_11247 N300_11247 N300_12289 N300_12289 N300_03519 N300_03519 N300_12219 N300_12219 N300_14965 N300_14965 N300_14931 N300_14931 N300_03461 N300_03461 N300_08702 N300_08702 N300_08710 N300_08710 N300_02670 N300_02670 N300_00486 N300_00486 N300_07127 N300_07127 LSM8 LSM8 N300_10497 N300_10497 N300_10136 N300_10136 N300_07412 N300_07412 N300_13304 N300_13304 N300_00519 N300_00519 N300_04680 N300_04680 N300_08742 N300_08742 N300_08709 N300_08709 N300_02977 N300_02977 N300_04162 N300_04162 N300_13395 N300_13395 N300_11896 N300_11896 N300_08080 N300_08080 N300_15492 N300_15492
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N300_06667Small nuclear ribonucleoprotein F. (65 aa)
N300_01910DNA-directed RNA polymerase II subunit RPB4. (120 aa)
N300_00900Polypyrimidine tract-binding protein 2. (519 aa)
N300_10380Pre-mRNA branch site protein p14. (115 aa)
N300_10375GC-rich sequence DNA-binding factor 2. (170 aa)
N300_14245Nuclease-sensitive element-binding protein 1. (215 aa)
N300_02812U11/U12 small nuclear ribonucleoprotein 48 kDa protein. (239 aa)
N300_08345Poly(U)-binding-splicing factor PUF60. (522 aa)
N300_07086Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32. (758 aa)
N300_03364G patch domain-containing protein 1. (950 aa)
N300_03294Serine/arginine-rich splicing factor 6. (265 aa)
N300_02764Poly(RC)-binding protein 3. (306 aa)
N300_01423Nuclease-sensitive element-binding protein 1. (269 aa)
N300_01933U2 snRNP-associated SURP motif-containing protein. (973 aa)
N300_06220RING finger protein 113A. (307 aa)
N300_06099Pre-mRNA-splicing factor CWC25. (405 aa)
N300_08898Calcium-regulated heat stable protein 1. (152 aa)
N300_10374GC-rich sequence DNA-binding factor 2. (566 aa)
N300_11081Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15. (625 aa)
N300_04627Survival of motor neuron-related-splicing factor 30. (240 aa)
N300_03265Putative ATP-dependent RNA helicase DHX35. (695 aa)
N300_12508Uncharacterized protein. (87 aa)
N300_09472Small nuclear ribonucleoprotein G. (76 aa)
N300_12123Programmed cell death protein 7. (227 aa)
N300_05677Pinin. (687 aa)
N300_12390Poly(RC)-binding protein 3. (297 aa)
N300_12093Splicing factor U2AF 35 kDa subunit. (178 aa)
N300_06992Protein lin-28 B. (249 aa)
N300_04022Protein mago nashi 2. (146 aa)
N300_06193ATP-dependent RNA helicase DHX8. (598 aa)
N300_08950Heterogeneous nuclear ribonucleoprotein A/B. (263 aa)
N300_04496Pre-mRNA-splicing factor CWC22. (870 aa)
N300_05369Serine/arginine-rich splicing factor 7. (241 aa)
N300_13177Cold shock domain-containing protein C2. (162 aa)
N300_13152Putative RNA-binding protein Luc7-like 2. (378 aa)
N300_13112WW domain-binding protein 11. (651 aa)
N300_05615RRM domain-containing protein. (71 aa)
N300_10923U4/U6 small nuclear ribonucleoprotein Prp3. (684 aa)
N300_04572Peptidyl-prolyl cis-trans isomerase G. (750 aa)
N300_05372Serine/arginine-rich splicing factor 7. (231 aa)
N300_04010Pre-mRNA-splicing factor 38A. (312 aa)
N300_10579Pre-mRNA-splicing factor RBM22. (402 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
N300_11534DNA-directed RNA polymerases I, II, and III subunit RPABC2. (132 aa)
N300_10347Tuftelin-interacting protein 11. (760 aa)
N300_10243U11/U12 small nuclear ribonucleoprotein 35 kDa protein. (244 aa)
N300_03034Heterogeneous nuclear ribonucleoprotein L-like. (429 aa)
N300_06315DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N300_03455Uroplakin-3b. (210 aa)
N300_03457DNA-directed RNA polymerase II subunit RPB11-a. (100 aa)
N300_01135Heterogeneous nuclear ribonucleoprotein Q. (426 aa)
N300_10834Serine/arginine-rich splicing factor 4. (446 aa)
N300_10850DnaJ subfamily C member 8. (228 aa)
N300_05459U5 small nuclear ribonucleoprotein 200 kDa helicase. (185 aa)
N300_12694Polypyrimidine tract-binding protein 3. (500 aa)
N300_12742Nuclear cap-binding protein subunit 1. (754 aa)
N300_13425DNA-directed RNA polymerase II subunit RPB3. (248 aa)
N300_07693Heterogeneous nuclear ribonucleoprotein H3. (334 aa)
N300_07946Serine/threonine-protein phosphatase 1 regulatory subunit 10. (464 aa)
N300_07308PAX3-and PAX7-binding protein 1. (807 aa)
N300_15596Small nuclear ribonucleoprotein-associated protein B. (188 aa)
N300_11669Splicing factor 3A subunit 2. (205 aa)
N300_09672Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides. (457 aa)
N300_15502DNA-directed RNA polymerase II subunit RPB9. (68 aa)
N300_09958RNA-binding protein 6. (1101 aa)
N300_13180PHD finger-like domain-containing protein 5A. (93 aa)
N300_11461Putative ATP-dependent RNA helicase DHX34. (1091 aa)
N300_00687SURP and G-patch domain-containing protein 1. (616 aa)
N300_02869Splicing factor 1. (139 aa)
N300_15615Beta-catenin-like 1. (562 aa)
N300_10011Poly(RC)-binding protein 4. (278 aa)
N300_02489Cold-inducible RNA-binding protein. (166 aa)
N300_02988Microfibrillar-associated protein 1. (421 aa)
N300_10917Splicing factor 3B subunit 4. (244 aa)
N300_03734Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (76 aa)
N300_11670Uncharacterized protein. (111 aa)
N300_09423U5 small nuclear ribonucleoprotein 40 kDa protein. (313 aa)
N300_01382RNA-binding protein 7. (230 aa)
N300_09050Protein BUD31. (113 aa)
N300_10013RNA-binding protein 5. (770 aa)
N300_15126Zinc finger matrin-type protein 2. (193 aa)
N300_02494DNA-directed RNA polymerases I, II, and III subunit RPABC1. (215 aa)
N300_03752U1 small nuclear ribonucleoprotein C. (157 aa)
N300_11360U2 small nuclear ribonucleoprotein B. (226 aa)
N300_07756Protein FAM32A. (111 aa)
N300_12791Serine/arginine-rich splicing factor 2. (219 aa)
N300_02187Cell division cycle 5-like. (803 aa)
N300_03056U6 snRNA-associated Sm-like LSm6. (80 aa)
N300_14354Zinc finger matrin-type protein 5. (102 aa)
N300_02014Ubiquitin-like 5. (73 aa)
N300_10458Pre-mRNA-splicing factor SPF27. (164 aa)
N300_13893Pre-mRNA-processing factor 19. (477 aa)
N300_07776SURP and G-patch domain-containing protein 2. (1083 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (121 aa)
N300_15273Thioredoxin-like 4A. (129 aa)
N300_15896WD repeat-containing protein 53. (353 aa)
N300_13454Protein SDE2. (194 aa)
N300_11990Pre-mRNA-processing factor 40 A. (879 aa)
N300_08180Peptidyl-prolyl cis-trans isomerase-like 2. (510 aa)
N300_09298Uncharacterized protein C9orf78. (262 aa)
N300_03888DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N300_15230RNA-binding protein 41. (402 aa)
N300_05867Serine/arginine repetitive matrix protein 1. (938 aa)
N300_05877Splicing factor 3A subunit 3. (457 aa)
N300_07217Putative ATP-dependent RNA helicase DHX33. (614 aa)
N300_15187Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (108 aa)
N300_01283CWF19-like 2. (162 aa)
N300_02315WW domain-binding protein 4. (396 aa)
N300_12604Serine/threonine-protein kinase PRP4. (992 aa)
N300_10538Splicing factor 3B subunit 5; Belongs to the SF3B5 family. (86 aa)
N300_04298Peptidylprolyl isomerase domain and WD repeat-containing protein 1. (581 aa)
N300_01514Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (117 aa)
N300_04306Splicing regulatory glutamine/lysine-rich protein 1. (492 aa)
N300_08700Calcium homeostasis endoplasmic reticulum protein. (904 aa)
N300_05927Tumor protein p63-regulated gene 1-like. (205 aa)
N300_04744RNA-binding motif protein, X chromosome. (388 aa)
N300_04749HIV Tat-specific factor 1. (394 aa)
N300_01052Transformer-2 protein alpha. (258 aa)
N300_02373U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa subunit-related protein 2. (460 aa)
N300_03468Pre-mRNA-processing-splicing factor 8. (2318 aa)
N300_05469U4/U6.U5 tri-snRNP-associated protein 2. (421 aa)
N300_08100RNA-binding protein 40. (449 aa)
N300_11472WD repeat-containing protein 25. (327 aa)
N300_15673Pre-mRNA-processing factor 6. (924 aa)
N300_13068Pre-mRNA-splicing factor SLU7. (581 aa)
N300_15583Thioredoxin-like protein; Plays role in pre-mRNA splicing. Belongs to the DIM1 family. (149 aa)
N300_11297RNA-binding motif protein, X-linked 2. (118 aa)
N300_01698Spliceosome-associated protein CWC15. (230 aa)
N300_15362RNA-binding protein Raly. (249 aa)
N300_13692Heterogeneous nuclear ribonucleoprotein K. (442 aa)
N300_05863Pre-mRNA-splicing factor syf2. (199 aa)
N300_08229Small nuclear ribonucleoprotein Sm D3. (126 aa)
N300_10741RNA-binding protein 25. (831 aa)
N300_06826Putative RNA-binding protein Luc7-like 1. (350 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (67 aa)
N300_02669ATP-dependent RNA helicase A. (855 aa)
N300_06705Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (161 aa)
N300_04884Luc7-like 3. (431 aa)
N300_05220Proline-rich protein PRCC. (318 aa)
N300_08648PCNA-interacting partner. (572 aa)
N300_12736WD40 repeat-containing protein SMU1. (505 aa)
N300_11247116 kDa U5 small nuclear ribonucleoprotein component. (972 aa)
N300_12289Zinc finger CCHC-type and RNA-binding motif-containing protein 1. (216 aa)
N300_03519Nuclear speckle splicing regulatory protein 1. (541 aa)
N300_12219Zinc finger protein 318. (1284 aa)
N300_14965Pleiotropic regulator 1. (513 aa)
N300_14931DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1173 aa)
N300_03461PRKR-interacting protein 1. (148 aa)
N300_08702Nipped-B-like B. (139 aa)
N300_08710Heterogeneous nuclear ribonucleoprotein M. (670 aa)
N300_02670ATP-dependent RNA helicase A. (372 aa)
N300_00486Pre-mRNA-splicing factor 18. (320 aa)
N300_07127NK-tumor recognition protein. (1458 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (88 aa)
N300_10497Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16. (153 aa)
N300_10136Dynein assembly factor with WDR repeat domains 1. (410 aa)
N300_07412WD repeat-containing protein 70. (616 aa)
N300_13304Nuclear cap-binding protein subunit 2; Component of the cap-binding complex (CBC), which binds co- transcriptionally to the 5' cap of pre-mRNAs and is involved in various processes such as pre-mRNA splicing, translation regulation, nonsense- mediated mRNA decay, RNA-mediated gene silencing (RNAi) by microRNAs (miRNAs) and mRNA export. The CBC complex is involved in mRNA export from the nucleus, leading to the recruitment of the mRNA export machinery to the 5' end of mRNA and to mRNA export in a 5' to 3' direction through the nuclear pore. The CBC complex is also involved in mediating U [...] (125 aa)
N300_00519Splicing factor 45. (401 aa)
N300_04680NKAP-like. (279 aa)
N300_08742U6 snRNA-associated Sm-like LSm7. (101 aa)
N300_08709Coiled-coil domain-containing protein 94. (181 aa)
N300_02977RNA-binding Raly-like. (205 aa)
N300_04162Nipped-B-like B. (120 aa)
N300_13395DNA-directed RNA polymerases I, II, and III subunit RPABC3. (142 aa)
N300_11896General transcription factor IIF subunit 2. (240 aa)
N300_08080U2 small nuclear ribonucleoprotein A. (228 aa)
N300_15492Smad nuclear-interacting protein 1. (237 aa)
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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