STRINGSTRING
N300_03599 N300_03599 N300_14501 N300_14501 N300_13134 N300_13134 N300_13130 N300_13130 N300_13120 N300_13120 N300_13115 N300_13115 N300_09630 N300_09630 N300_09620 N300_09620 N300_12754 N300_12754 N300_12212 N300_12212 N300_05466 N300_05466 N300_02022 N300_02022 N300_06315 N300_06315 N300_01032 N300_01032 N300_09728 N300_09728 N300_04939 N300_04939 N300_01066 N300_01066 N300_13395 N300_13395 N300_06230 N300_06230 N300_08927 N300_08927 N300_03776 N300_03776 N300_02494 N300_02494 N300_01633 N300_01633 N300_13455 N300_13455 N300_02161 N300_02161 N300_01599 N300_01599 N300_15202 N300_15202 N300_11494 N300_11494 N300_03888 N300_03888 N300_04314 N300_04314 N300_00407 N300_00407 N300_01710 N300_01710 N300_05402 N300_05402 N300_06503 N300_06503 N300_02242 N300_02242 N300_13132 N300_13132 N300_11102 N300_11102 N300_13122 N300_13122 N300_15341 N300_15341 N300_13124 N300_13124 N300_13119 N300_13119 N300_13131 N300_13131 N300_13126 N300_13126 N300_13121 N300_13121 N300_10970 N300_10970 N300_13118 N300_13118 N300_13113 N300_13113 N300_11534 N300_11534 N300_10238 N300_10238
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
N300_03599TFIIH basal transcription factor complex helicase XPB subunit. (705 aa)
N300_14501TATA box-binding protein-associated factor, RNA polymerase I, subunit C. (234 aa)
N300_13134Histone H2A; Belongs to the histone H2A family. (90 aa)
N300_13130Histone H2A; Belongs to the histone H2A family. (129 aa)
N300_13120Histone H3.2. (83 aa)
N300_13115Histone H2B; Belongs to the histone H2B family. (126 aa)
N300_09630General transcription factor IIH subunit 5. (71 aa)
N300_09620TATA box-binding protein-associated factor RNA polymerase I subunit A. (411 aa)
N300_12754General transcription factor IIH subunit. (395 aa)
N300_12212DNA-directed RNA polymerases I and III subunit RPAC1. (303 aa)
N300_05466Histone H2A; Belongs to the histone H2A family. (116 aa)
N300_02022Histone H2B; Belongs to the histone H2B family. (126 aa)
N300_06315DNA-directed RNA polymerases I, II, and III subunit RPABC5. (67 aa)
N300_01032DNA-directed RNA polymerase I subunit RPA43. (248 aa)
N300_09728TATA box-binding protein-like 1. (183 aa)
N300_04939Histone H3; Belongs to the histone H3 family. (136 aa)
N300_01066Chromobox protein 3. (176 aa)
N300_13395DNA-directed RNA polymerases I, II, and III subunit RPABC3. (142 aa)
N300_06230Nucleolar transcription factor 1. (620 aa)
N300_08927RNA polymerase I-specific transcription initiation factor RRN3. (613 aa)
N300_03776Uncharacterized protein. (62 aa)
N300_02494DNA-directed RNA polymerases I, II, and III subunit RPABC1. (215 aa)
N300_01633CDK-activating kinase assembly factor MAT1. (279 aa)
N300_13455Histone H3.3. (94 aa)
N300_02161DNA-directed RNA polymerase I subunit RPA49. (405 aa)
N300_01599TATA-box-binding protein. (170 aa)
N300_15202Acidic repeat-containing protein. (233 aa)
N300_11494TATA-box-binding protein. (311 aa)
N300_03888DNA-directed RNA polymerases I, II, and III subunit RPABC4. (55 aa)
N300_04314Cyclin-dependent kinase 7. (317 aa)
N300_00407Histone H2B; Belongs to the histone H2B family. (126 aa)
N300_01710TATA box-binding protein-associated factor RNA polymerase I subunit D. (200 aa)
N300_05402DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1020 aa)
N300_06503General transcription factor IIH subunit 1. (548 aa)
N300_02242Histone H2A; Belongs to the histone H2A family. (128 aa)
N300_13132Histone H2A; Belongs to the histone H2A family. (86 aa)
N300_11102Histone H3; Belongs to the histone H3 family. (136 aa)
N300_13122Histone H2B 1/2/3/4/6; Belongs to the histone H2B family. (126 aa)
N300_15341TATA box-binding protein-associated factor RNA polymerase I subunit B. (573 aa)
N300_13124Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
N300_13119Histone H2B; Belongs to the histone H2B family. (126 aa)
N300_13131Histone H2B 1/2/3/4/6; Belongs to the histone H2B family. (115 aa)
N300_13126Histone H3. (75 aa)
N300_13121Histone H2A; Belongs to the histone H2A family. (129 aa)
N300_10970Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
N300_13118Histone H2A; Belongs to the histone H2A family. (103 aa)
N300_13113Histone H2A; Belongs to the histone H2A family. (113 aa)
N300_11534DNA-directed RNA polymerases I, II, and III subunit RPABC2. (132 aa)
N300_10238General transcription factor IIH subunit 3. (309 aa)
Your Current Organism:
Calypte anna
NCBI taxonomy Id: 9244
Other names: C. anna
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