STRINGSTRING
AKF09353.1 AKF09353.1 AKF03221.1 AKF03221.1 AKF03375.1 AKF03375.1 AKF03463.1 AKF03463.1 AKF03779.1 AKF03779.1 AKF04742.1 AKF04742.1 AKF04928.1 AKF04928.1 AKF04936.1 AKF04936.1 AKF06372.1 AKF06372.1 AKF06944.1 AKF06944.1 AKF06991.1 AKF06991.1 glyA glyA hemL hemL AKF07504.1 AKF07504.1 iscS iscS AKF07969.1 AKF07969.1 gcvPA gcvPA AKF08117.1 AKF08117.1 AKF08237.1 AKF08237.1 hisC hisC AKF08602.1 AKF08602.1 AKF11506.1 AKF11506.1 serC serC AKF11542.1 AKF11542.1 AKF08726.1 AKF08726.1 argD argD AKF09394.1 AKF09394.1 kbl kbl AKF09828.1 AKF09828.1 AKF10393.1 AKF10393.1 AKF10688.1 AKF10688.1 AKF10766.1 AKF10766.1 AKF11013.1 AKF11013.1 AKF11113.1 AKF11113.1 AKF11224.1 AKF11224.1 AKF11449.1 AKF11449.1 AKF11467.1 AKF11467.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKF09353.1Transcriptional regulator, GntR family protein. (480 aa)
AKF03221.1DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family. (626 aa)
AKF03375.1Gamma-aminobutyrate alpha-ketoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (447 aa)
AKF03463.1Pyridoxal-dependent decarboxylase. (478 aa)
AKF03779.1Cystathionine gamma-lyase. (390 aa)
AKF04742.1Hypothetical protein. (385 aa)
AKF04928.1Aspartate aminotransferase. (447 aa)
AKF04936.1Serine--pyruvate aminotransferase. (419 aa)
AKF06372.1Lipopolysaccharide biosynthesis protein RffA; Belongs to the DegT/DnrJ/EryC1 family. (436 aa)
AKF06944.1Cysteine desulfurase. (369 aa)
AKF06991.1Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; Belongs to the DegT/DnrJ/EryC1 family. (401 aa)
glyASerine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (417 aa)
hemLGlutamate-1-semialdehyde aminotransferase. (428 aa)
AKF07504.18-amino-7-oxononanoate synthase. (439 aa)
iscSCysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins. (408 aa)
AKF07969.1Aspartate aminotransferase. (487 aa)
gcvPAGlycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. (437 aa)
AKF08117.1Cystathionine gamma-synthase. (382 aa)
AKF08237.1Cystathionine gamma-lyase. (395 aa)
hisCHistidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (366 aa)
AKF08602.1Low-specificity L-threonine aldolase. (344 aa)
AKF11506.1Aspartate aminotransferase. (436 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily. (367 aa)
AKF11542.1Glycine dehydrogenase. (464 aa)
AKF08726.1Glutamate-1-semialdehyde aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (420 aa)
argDAcetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. (404 aa)
AKF09394.1Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (419 aa)
kbl2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. (399 aa)
AKF09828.1Putative acetyltransferase; Belongs to the DegT/DnrJ/EryC1 family. (567 aa)
AKF10393.1Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (446 aa)
AKF10688.1Aspartate aminotransferase. (400 aa)
AKF10766.1Serine--pyruvate aminotransferase. (556 aa)
AKF11013.1Bacillosamine/Legionaminic acid biosynthesis aminotransferase PglE; Belongs to the DegT/DnrJ/EryC1 family. (364 aa)
AKF11113.1Cysteine desulfurase. (390 aa)
AKF11224.1Transcriptional regulator, GntR family protein. (509 aa)
AKF11449.18-amino-7-oxononanoate synthase. (307 aa)
AKF11467.1Sphingosine-1-phosphate lyase. (496 aa)
Your Current Organism:
Sandaracinus amylolyticus
NCBI taxonomy Id: 927083
Other names: DSM 53668, NCCB 100362, S. amylolyticus, Sandaracinus amylolyticus Mohr et al. 2012, Sorangiineae bacterium NOSO 4, strain NOSO-4
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